RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 SVOPLQ8N434 492 aa15□□□□□ -0.01
PKP3-208ENST00000531857 LINC01356Q8N9X3 169 aa15□□□□□ -0.01
PKP3-208ENST00000531857 VPS37AQ8NEZ2 397 aa15□□□□□ -0.01
PKP3-208ENST00000531857 TESCQ96BS2 214 aa15□□□□□ -0.01
PKP3-208ENST00000531857 CDRT15Q96T59 188 aa15□□□□□ -0.01
PKP3-208ENST00000531857 DOK1Q99704 481 aa15□□□□□ -0.01
PKP3-208ENST00000531857 TRIM15Q9C019 465 aa15□□□□□ -0.01
PKP3-208ENST00000531857 PIF1Q9H611 641 aa15□□□□□ -0.01
PKP3-208ENST00000531857 POMPQ9Y244 141 aa15□□□□□ -0.01
PKP3-208ENST00000531857 TMEM129A0AVI4 362 aa14.99□□□□□ -0.01
PKP3-208ENST00000531857 CLNS1AP54105 237 aaKnown RBP14.99□□□□□ -0.01
PKP3-208ENST00000531857 C3orf36Q3SXR2 165 aa14.99□□□□□ -0.01
PKP3-208ENST00000531857 COX20Q5RI15 118 aa14.99□□□□□ -0.01
PKP3-208ENST00000531857 NIPAL3Q6P499 406 aa14.99□□□□□ -0.01
PKP3-208ENST00000531857 LRRC74BQ6ZQY2 392 aa14.99□□□□□ -0.01
PKP3-208ENST00000531857 NUP37Q8NFH4 326 aa14.99□□□□□ -0.01
PKP3-208ENST00000531857 NEU4Q8WWR8 484 aaPredicted RBP14.99□□□□□ -0.01
PKP3-208ENST00000531857 HPS1Q92902 700 aa14.99□□□□□ -0.01
PKP3-208ENST00000531857 SPDL1Q96EA4 605 aa14.99□□□□□ -0.01
PKP3-208ENST00000531857 PLA2G12AQ9BZM1 189 aa14.99□□□□□ -0.01
PKP3-208ENST00000531857 MTHFD2LQ9H903 347 aaPredicted RBP14.99□□□□□ -0.01
PKP3-208ENST00000531857 SH3PXD2BA1X283 911 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 ZNF503-AS2A6NEH8 195 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 CCDC154A6NI56 674 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 LYNX1G3V0Z9 82 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 WIPF1O43516 503 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 IGKV3-15P01624 115 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 IL6P05231 212 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 DBIP07108 87 aaKnown RBP14.98□□□□□ -0.01
PKP3-208ENST00000531857 LYNX1P0DP58 116 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 NPR2P20594 1047 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 CFPP27918 469 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 VHLP40337 213 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 ACAA2P42765 397 aaKnown RBP14.98□□□□□ -0.01
PKP3-208ENST00000531857 CDKN2CP42773 168 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 POLR2JP52435 117 aaKnown RBP14.98□□□□□ -0.01
PKP3-208ENST00000531857 CDH15P55291 814 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 RIN1Q13671 783 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 MAPK11Q15759 364 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 FAM174BQ3ZCQ3 159 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 C8orf82Q6P1X6 216 aaPredicted RBP14.98□□□□□ -0.01
PKP3-208ENST00000531857 MSANTD1Q6ZTZ1 278 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 VRK2Q86Y07 508 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 KDM8Q8N371 416 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 ZNF786Q8N393 782 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 CADM2Q8N3J6 435 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 DPP10Q8N608 796 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 OR4F15Q8NGB8 312 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 MAGEE2Q8TD90 523 aaPredicted RBP14.98□□□□□ -0.01
PKP3-208ENST00000531857 ASB9Q96DX5 294 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 TEX37Q96LM6 180 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 CCDC115Q96NT0 180 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 SH3GL1Q99961 368 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 ZNF442Q9H7R0 627 aa14.98□□□□□ -0.01
PKP3-208ENST00000531857 CDHR4A6H8M9 788 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 A8MVM7 634 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 TMEM229AB2RXF0 380 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 FRS3O43559 492 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 VENTXO95231 258 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 GSNP06396 782 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 NR2F1P10589 423 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 UQCRBP14927 111 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 HOXB6P17509 224 aaKnown RBP14.97□□□□□ -0.01
PKP3-208ENST00000531857 PAX7P23759 505 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 S100A3P33764 101 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 NME5P56597 212 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 ROR2Q01974 943 aaKnown RBP14.97□□□□□ -0.01
PKP3-208ENST00000531857 CCNIQ14094 377 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 TRIM25Q14258 630 aaKnown RBP14.97□□□□□ -0.01
PKP3-208ENST00000531857 GNA13Q14344 377 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 RCN1Q15293 331 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 DPY19L1Q2PZI1 675 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 SWT1Q5T5J6 900 aaKnown RBP14.97□□□□□ -0.01
PKP3-208ENST00000531857 PRAMEF8Q5VWM4 474 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 PRAMEF7Q5VXH5 474 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 C12orf54Q6X4T0 127 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 ZNF836Q6ZNA1 936 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 FUNDC1Q8IVP5 155 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 CDK20Q8IZL9 346 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 FAM169BQ8N8A8 192 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 PNPT1Q8TCS8 783 aaKnown RBP14.97□□□□□ -0.01
PKP3-208ENST00000531857 UBASH3BQ8TF42 649 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 TAPBPLQ9BX59 468 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 S100A14Q9HCY8 104 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 BTNL2Q9UIR0 455 aa14.97□□□□□ -0.01
PKP3-208ENST00000531857 VAMP5O95183 116 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 ANP32DO95626 131 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 PRG2P13727 222 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 HSD17B1P14061 328 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 IFNGR1P15260 489 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 CBR1P16152 277 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 ARF1P84077 181 aaKnown RBP14.96□□□□□ -0.01
PKP3-208ENST00000531857 LRRC74AQ0VAA2 488 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 FLOT2Q14254 428 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 ADRM1Q16186 407 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 C1orf140Q5VVS0 124 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 WBP2NLQ6ICG8 309 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 PEX5LQ8IYB4 626 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 ZNF440Q8IYI8 595 aa14.96□□□□□ -0.01
PKP3-208ENST00000531857 ZNF837Q96EG3 531 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms