RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 NELFAQ9H3P2 528 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 PLK3Q9H4B4 646 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 SEC61A2Q9H9S3 476 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 MOV10Q9HCE1 1003 aaKnown RBP11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 BCL2L10Q9HD36 194 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 KCNS2Q9ULS6 477 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 RCE1Q9Y256 329 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 PLCE1Q9P212 2302 aa11.13□□□□□ -0.63
TM9SF1-211ENST00000531406 RTTNQ86VV8 2226 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 ALPK2Q86TB3 2170 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 TMEM247A6NEH6 219 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 RPL36A-HNRNPH2H7BZ11 118 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 PDE5AO76074 875 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 ZNF432O94892 652 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 NUDT7P0C024 238 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 APEHP13798 732 aaKnown RBP11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 IGFBP5P24593 272 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 CALCRP30988 508 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 RPS5P46782 204 aaKnown RBP11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 CLDN17P56750 224 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 HGFACQ04756 655 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 KRTAP24-1Q3LI83 254 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 SLC2A7Q6PXP3 512 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 VHLLQ6RSH7 139 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 RINLQ6ZS11 566 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 PGAM4Q8N0Y7 254 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 RBM15BQ8NDT2 890 aaKnown RBP11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 ANKK1Q8NFD2 765 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 OR4F15Q8NGB8 312 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 SLC35B4Q969S0 331 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 MCUR1Q96AQ8 359 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 KTI12Q96EK9 354 aaPredicted RBP11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 HOPXQ9BPY8 73 aaPredicted RBP11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 BTBD10Q9BSF8 475 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 MYOZ1Q9NP98 299 aaPredicted RBP11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 A4GALTQ9NPC4 353 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 SLC52A3Q9NQ40 469 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 SEC14L4Q9UDX3 406 aa11.12□□□□□ -0.63
TM9SF1-211ENST00000531406 FZD7O75084 574 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 SLC43A1O75387 559 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 IGKV3-15P01624 115 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 CELA3BP08861 270 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 CBR1P16152 277 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 ZNF43P17038 809 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 SRD5A1P18405 259 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 GTF2E2P29084 291 aaKnown RBP11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 PPOXP50336 477 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 C1DQ13901 141 aaKnown RBP11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 RGNQ15493 299 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 IQCCQ4KMZ1 466 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 PAGE3Q5JUK9 113 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 FAM120AOSQ5T036 256 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 IL17RELQ6ZVW7 336 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 RETREG3Q86VR2 466 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 ZNF540Q8NDQ6 660 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 NUP37Q8NFH4 326 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 GTF2H4Q92759 462 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 MAL2Q969L2 176 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 TAAR8Q969N4 342 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 LRRC58Q96CX6 371 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 OXGR1Q96P68 337 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 PAIP1Q9H074 479 aaKnown RBP11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 CHODLQ9H9P2 273 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 GPR35Q9HC97 309 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 SPAG4Q9NPE6 437 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 B3GAT1Q9P2W7 334 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 PRPF19Q9UMS4 504 aaKnown RBP11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 PCDHB14Q9Y5E9 798 aa11.11□□□□□ -0.63
TM9SF1-211ENST00000531406 IGHV2OR16-5A0A0B4J2B6 119 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 VSTM5A8MXK1 200 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 M0R082 166 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 OR2T1O43869 369 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 DNAJC8O75937 253 aaPredicted RBP11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 BMP2P12643 396 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 ZNF23P17027 643 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 NPR2P20594 1047 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 PPIBP23284 216 aaKnown RBP11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 THBS4P35443 961 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 IDH3GP51553 393 aaPredicted RBP11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 LRIF1Q5T3J3 769 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 MYPOPQ86VE0 399 aaPredicted RBP11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 DEFB107AQ8IZN7 70 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 GPR137CQ8N3F9 429 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 OR8J3Q8NGG0 315 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 BBS10Q8TAM1 723 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 ZNF417Q8TAU3 575 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 SLC7A6OSQ96CW6 309 aaPredicted RBP11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 ZNF837Q96EG3 531 aaPredicted RBP11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 RAB3IPQ96QF0 476 aaPredicted RBP11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 OR2M2Q96R28 347 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 ZNF587Q96SQ5 575 aaPredicted RBP11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 CGREF1Q99674 301 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 DOK1Q99704 481 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 SH3GL1Q99961 368 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 RSPO3Q9BXY4 272 aaPredicted RBP11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 BPESC1Q9GZL8 116 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 RAB1BQ9H0U4 201 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 RAD21L1Q9H4I0 556 aa11.1□□□□□ -0.63
TM9SF1-211ENST00000531406 ZNF442Q9H7R0 627 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms