RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 AQP1P29972 269 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 THBS4P35443 961 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 ARR3P36575 388 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 PPOXP50336 477 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 IDH3GP51553 393 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-205ENST00000531042 GGTLC2Q14390 218 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 SQLEQ14534 574 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 NHLRC1Q6VVB1 395 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 ARMC8Q8IUR7 673 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 CCDC36Q8IYA8 594 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 C20orf196Q8IYI0 205 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 SCAIQ8N9R8 606 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 HIPK4Q8NE63 616 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 ATP6V1G3Q96LB4 118 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 FOXN4Q96NZ1 517 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 CPPED1Q9BRF8 314 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-205ENST00000531042 BEX2Q9BXY8 128 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 ZNF442Q9H7R0 627 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 EVA1AQ9H8M9 152 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 MYOZ1Q9NP98 299 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-205ENST00000531042 FBXO9Q9UK97 447 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-205ENST00000531042 SLC13A4Q9UKG4 626 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 STAB1Q9NY15 2570 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 SVEP1Q4LDE5 3571 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 IGHV2OR16-5A0A0B4J2B6 119 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 SEC14L2O76054 403 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 MFN2O95140 757 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 GZMKP49863 264 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 CDH12P55289 794 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 POU3F1Q03052 451 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-205ENST00000531042 NPRL3Q12980 569 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 RUNDC3AQ59EK9 446 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 CARD17Q5XLA6 110 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 MDP1Q86V88 176 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 RANBP3LQ86VV4 465 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-205ENST00000531042 IL17RDQ8NFM7 739 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 LRR1Q96L50 414 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 MOGAT1Q96PD6 335 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 DOK1Q99704 481 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 TMEM43Q9BTV4 400 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 EMC6Q9BV81 110 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 ASPNQ9BXN1 380 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 RAB1BQ9H0U4 201 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 RABEP2Q9H5N1 569 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 B3GNT2Q9NY97 397 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 MRPL39Q9NYK5 338 aaKnown RBP13.67□□□□□ -0.22
CPSF1-205ENST00000531042 LPAR3Q9UBY5 353 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 USP22Q9UPT9 525 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 ANGPT4Q9Y264 503 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 NOX1Q9Y5S8 564 aa13.67□□□□□ -0.22
CPSF1-205ENST00000531042 SLC35F4A4IF30 521 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 VSTM5A8MXK1 200 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 hCG_2039718K7EN88 272 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 LMX1BO60663 402 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 NPR2P20594 1047 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 CAPZA2P47755 286 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 PCBP3P57721 371 aaKnown RBP13.66□□□□□ -0.22
CPSF1-205ENST00000531042 PMS2P3Q13401 168 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 CARTPTQ16568 116 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 TTMPQ5BVD1 217 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 SWT1Q5T5J6 900 aaKnown RBP13.66□□□□□ -0.22
CPSF1-205ENST00000531042 LINC00114Q6XXX2 140 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 PTOV1Q86YD1 416 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 WDFY1Q8IWB7 410 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 PHC2Q8IXK0 858 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 SMYD1Q8NB12 490 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 DYDC1Q8WWB3 177 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 TMEM158Q8WZ71 300 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 TXNDC15Q96J42 360 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 ANKRD27Q96NW4 1050 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 MED29Q9NX70 200 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 LEF1Q9UJU2 399 aaPredicted RBP13.66□□□□□ -0.22
CPSF1-205ENST00000531042 MALRD1Q5VYJ5 2156 aa13.66□□□□□ -0.22
CPSF1-205ENST00000531042 IGHV4-61A0A0C4DH41 118 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 TMEM129A0AVI4 362 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 LRRN3E7EW58 273 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 M0R3H8 397 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 PLPP3O14495 311 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 FMO6PO60774 539 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 HLA-HP01893 362 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 PUDPQ08623 228 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 RBBP4Q09028 425 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 DAG1Q14118 895 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 DUSP7Q16829 419 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 IQCCQ4KMZ1 466 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 FAM166AQ6J272 317 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 ZNF613Q6PF04 617 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 ZNF627Q7L945 461 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 SPATA21Q7Z572 469 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 PXKQ7Z7A4 578 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 DHDDSQ86SQ9 333 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 SVOPLQ8N434 492 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 DPP10Q8N608 796 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 C10orf53Q8N6V4 93 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 ARIH2OSQ8N7S6 290 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 C11orf65Q8NCR3 313 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 ZNF540Q8NDQ6 660 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 STON2Q8WXE9 905 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 MSI2Q96DH6 328 aaKnown RBP13.65□□□□□ -0.22
CPSF1-205ENST00000531042 MCHR1Q99705 422 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms