RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 LPAR3Q9UBY5 353 aa18.15■□□□□ 0.5
SMPD1-204ENST00000530395 USP22Q9UPT9 525 aa18.15■□□□□ 0.5
SMPD1-204ENST00000530395 LOC390937A0A1W2PQ73 354 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 ZNF99A8MXY4 864 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-204ENST00000530395 M0R3G1 203 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 IGHV4-31P0DP07 118 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 ZNF16P17020 682 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-204ENST00000530395 PPOXP50336 477 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 NPRL3Q12980 569 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 C10orf53Q8N6V4 93 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 ANKS4BQ8N8V4 417 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 IL17RDQ8NFM7 739 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 SLC41A3Q96GZ6 507 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 CPPED1Q9BRF8 314 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-204ENST00000530395 BEX2Q9BXY8 128 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 RAB1BQ9H0U4 201 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 ZNF442Q9H7R0 627 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 SEC61A2Q9H9S3 476 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 LEF1Q9UJU2 399 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-204ENST00000530395 SVEP1Q4LDE5 3571 aa18.14■□□□□ 0.49
SMPD1-204ENST00000530395 RNF212BA8MTL3 300 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 VWC2LB2RUY7 222 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 MS4A18H0YCH9 400 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 ERCC1P07992 297 aaPredicted RBP18.13■□□□□ 0.49
SMPD1-204ENST00000530395 CELA3BP08861 270 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 NR4A2P43354 598 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 POU3F1Q03052 451 aaPredicted RBP18.13■□□□□ 0.49
SMPD1-204ENST00000530395 PMS2P3Q13401 168 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 MS4A18Q3C1V0 323 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 CARD17Q5XLA6 110 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 SNX32Q86XE0 403 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 C20orf196Q8IYI0 205 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 C11orf65Q8NCR3 313 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 ANKRD27Q96NW4 1050 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 TMEM43Q9BTV4 400 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 MRPL39Q9NYK5 338 aaKnown RBP18.13■□□□□ 0.49
SMPD1-204ENST00000530395 NOX1Q9Y5S8 564 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 MALRD1Q5VYJ5 2156 aa18.13■□□□□ 0.49
SMPD1-204ENST00000530395 SEC14L2O76054 403 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 HPRP00739 348 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 BGLAPP02818 100 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 NPR2P20594 1047 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 CDH12P55289 794 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 PUDPQ08623 228 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 RBBP4Q09028 425 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 ADRM1Q16186 407 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 CYP51A1Q16850 503 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 RUNDC3AQ59EK9 446 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 DLEU7Q6UYE1 221 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 DHDDSQ86SQ9 333 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 MDP1Q86V88 176 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 MYPOPQ86VE0 399 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-204ENST00000530395 ZNF540Q8NDQ6 660 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 ZNF837Q96EG3 531 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-204ENST00000530395 LRR1Q96L50 414 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 SHARPINQ9H0F6 387 aa18.12■□□□□ 0.49
SMPD1-204ENST00000530395 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.12■□□□□ 0.49
SMPD1-204ENST00000530395 IGHV2OR16-5A0A0B4J2B6 119 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 ZNF726A6NNF4 738 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 hCG_2039718K7EN88 272 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 ANGPT2O15123 496 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 FMO6PO60774 539 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 MFN2O95140 757 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 HLA-DOBP13765 273 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 APEHP13798 732 aaKnown RBP18.11■□□□□ 0.49
SMPD1-204ENST00000530395 THBS4P35443 961 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 HGFACQ04756 655 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 IQCCQ4KMZ1 466 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 TTMPQ5BVD1 217 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 ZNF613Q6PF04 617 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 SPATA21Q7Z572 469 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 SMYD1Q8NB12 490 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 STON2Q8WXE9 905 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 MOGAT1Q96PD6 335 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 EMC6Q9BV81 110 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 REPIN1Q9BWE0 567 aaKnown RBP18.11■□□□□ 0.49
SMPD1-204ENST00000530395 INTS9Q9NV88 658 aaKnown RBP18.11■□□□□ 0.49
SMPD1-204ENST00000530395 KCNS2Q9ULS6 477 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 TRIM33Q9UPN9 1127 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 POFUT2Q9Y2G5 429 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 NDUFAF1Q9Y375 327 aa18.11■□□□□ 0.49
SMPD1-204ENST00000530395 SLC35F4A4IF30 521 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 ZNF503-AS2A6NEH8 195 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 LMX1BO60663 402 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 TPST2O60704 377 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 MT-ATP6P00846 226 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 AHCYP23526 432 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 PCBP3P57721 371 aaKnown RBP18.1■□□□□ 0.49
SMPD1-204ENST00000530395 SNTB2Q13425 540 aaKnown RBP18.1■□□□□ 0.49
SMPD1-204ENST00000530395 DAG1Q14118 895 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 PHYHD1Q5SRE7 291 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 FAM166AQ6J272 317 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 PXKQ7Z7A4 578 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 SVOPLQ8N434 492 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 OR6N1Q8NGY5 312 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 NEU4Q8WWR8 484 aaPredicted RBP18.1■□□□□ 0.49
SMPD1-204ENST00000530395 TMEM158Q8WZ71 300 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 FOXN4Q96NZ1 517 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 MCHR1Q99705 422 aa18.1■□□□□ 0.49
SMPD1-204ENST00000530395 ARHGDIGQ99819 225 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms