RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SLC35F4A4IF30 521 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 ZNF587BE7ETH6 402 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 BLOC1S5-TXNDC5H3BN57 136 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 RPL36A-HNRNPH2H7BZ11 118 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 RNF13O43567 381 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 PIP5K1CO60331 668 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 UBOX5O94941 541 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 TSPAN19P0C672 248 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 IFI30P13284 250 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 IFNGR1P15260 489 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 NR1H2P55055 460 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 VLDLRP98155 873 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 PRKCDQ05655 676 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 TBPL2Q6SJ96 375 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 SLC35D2Q76EJ3 337 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 NANOGNBQ7Z5D8 188 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 WDFY1Q8IWB7 410 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 C20orf196Q8IYI0 205 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 C17orf78Q8N4C9 275 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 WDR31Q8NA23 367 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 ANKK1Q8NFD2 765 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 ACOT11Q8WXI4 607 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 BPIFA2Q96DR5 249 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 LRR1Q96L50 414 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 TMEM204Q9BSN7 226 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 EMC6Q9BV81 110 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 ANKRD19PQ9H560 264 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 SLC25A15Q9Y619 301 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 V9GYQ6 96 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 A0A1W2PRQ8 180 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 ZNF726A6NNF4 738 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 hCG_2039718K7EN88 272 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 SERPINI2O75830 405 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 H1F0P07305 194 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 ITGA2P17301 1181 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 CDH2P19022 906 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 MAKP20794 623 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 AQP2P41181 271 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 ROR2Q01974 943 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 RPL18Q07020 188 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 DGCR6Q14129 220 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 TRIM25Q14258 630 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 PHYHD1Q5SRE7 291 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 NCMAPQ5T1S8 102 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 C1QTNF12Q5T7M4 302 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 CARD17Q5XLA6 110 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 HMBOX1Q6NT76 420 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 CYP2R1Q6VVX0 501 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 ZNF730Q6ZMV8 503 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 MBOAT2Q6ZWT7 520 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 NRMQ8IXM6 262 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 GPR137CQ8N3F9 429 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 OR1K1Q8NGR3 316 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 OR52N5Q8NH56 324 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 OR6X1Q8NH79 312 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 ADAD1Q96M93 576 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 ALKBH3Q96Q83 286 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 PIP5K1AQ99755 562 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 MUC13Q9H3R2 512 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 GPR35Q9HC97 309 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 SLC17A5Q9NRA2 495 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 ST6GALNAC2Q9UJ37 374 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 EDARQ9UNE0 448 aa11.12□□□□□ -0.63
CCDC90B-216ENST00000529856 AKAP6Q13023 2319 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 A0A1W2PR80 420 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 DPRXA6NFQ7 191 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 PDE5AO76074 875 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 DIRAS1O95057 198 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 F13BP05160 661 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 ATP6V1B2P21281 511 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 BIDP55957 195 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 MS4A2Q01362 244 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 CAMK2DQ13557 499 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 LAPTM4AQ15012 233 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 MTX3Q5HYI7 312 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 PODNL1Q6PEZ8 512 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 RRM2BQ7LG56 351 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 DHFR2Q86XF0 187 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 CDK20Q8IZL9 346 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 SLC7A13Q8TCU3 470 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 BCL2L2Q92843 193 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 NINJ1Q92982 152 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 MCUR1Q96AQ8 359 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 SLC7A6OSQ96CW6 309 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 ZNF837Q96EG3 531 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 CLPTM1LQ96KA5 538 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 DHRS1Q96LJ7 313 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 THTPAQ9BU02 230 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 ESRP2Q9H6T0 727 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 CRLF2Q9HC73 371 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 IL1RAPQ9NPH3 570 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 INIPQ9NRY2 104 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 NPAP1Q9NZP6 1156 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 HIF3AQ9Y2N7 669 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 AMDHD2Q9Y303 409 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 ANKRD17O75179 2603 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 CSMD1Q96PZ7 3565 aa11.11□□□□□ -0.63
CCDC90B-216ENST00000529856 A0A1W2PRG6 482 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 TCRBV5S2A0A599 114 aa11.1□□□□□ -0.63
CCDC90B-216ENST00000529856 EFCAB9A8MZ26 197 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms