RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TSC22D1Q15714 1073 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 TMEM249Q2WGJ8 235 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 COQ5Q5HYK3 327 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 SFRP5Q5T4F7 317 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 FAM91A1Q658Y4 838 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 NANOGP8Q6NSW7 305 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 Q6ZT83 130 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 NET1Q7Z628 596 aaPredicted RBP7.44□□□□□ -1.22
SSBP3-212ENST00000528930 GALNT5Q7Z7M9 940 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 LSMEM1Q8N8F7 131 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 C10orf82Q8WW14 230 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 DNAJC9Q8WXX5 260 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 SPATA5L1Q9BVQ7 753 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 ACTR6Q9GZN1 396 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 NANOGQ9H9S0 305 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 CACYBPQ9HB71 228 aaKnown RBP7.44□□□□□ -1.22
SSBP3-212ENST00000528930 FANCFQ9NPI8 374 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 COMMD3-BMI1R4GMX3 469 aa7.44□□□□□ -1.22
SSBP3-212ENST00000528930 LOC100653049A0A140TA62 436 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 A0A1B0GWA3 101 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 FTCDNL1E5RQL4 147 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 M0QX08 132 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 FZD7O75084 574 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 SERPINB7O75635 380 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 KRT34O76011 436 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 LGI1O95970 557 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 IDUAP35475 653 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 ITGADQ13349 1161 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 SLC17A1Q14916 467 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 P2RY6Q15077 328 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 DUSP7Q16829 419 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 TRMT5Q32P41 509 aaKnown RBP7.43□□□□□ -1.22
SSBP3-212ENST00000528930 LRRC23Q53EV4 343 aaPredicted RBP7.43□□□□□ -1.22
SSBP3-212ENST00000528930 REP15Q6BDI9 236 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 PAQR6Q6TCH4 344 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 SEZ6L2Q6UXD5 910 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 CALHM3Q86XJ0 350 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 KRT73Q86Y46 540 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 ARMC8Q8IUR7 673 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 FITM2Q8N6M3 262 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 TMEM99Q8N816 258 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 ZIC4Q8N9L1 334 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 C11orf65Q8NCR3 313 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 BHLHE22Q8NFJ8 381 aaPredicted RBP7.43□□□□□ -1.22
SSBP3-212ENST00000528930 STEAP2Q8NFT2 490 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 GPR32P1Q8NGA4 272 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 OR10A6Q8NH74 314 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 PIGXQ8TBF5 258 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 STK35Q8TDR2 534 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 TMEM171Q8WVE6 324 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 S100PBPQ96BU1 408 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 LRRC58Q96CX6 371 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 ZHX1-C8orf76Q96EF9 292 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 PIK3IP1Q96FE7 263 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 ZNF607Q96SK3 696 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 NAA11Q9BSU3 229 aaPredicted RBP7.43□□□□□ -1.22
SSBP3-212ENST00000528930 PTDSS2Q9BVG9 487 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 HDHD5Q9BXW7 423 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 C12orf10Q9HB07 376 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 MRGBPQ9NV56 204 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 EMC3Q9P0I2 261 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 ANGPT4Q9Y264 503 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 FLVCR1Q9Y5Y0 555 aa7.43□□□□□ -1.22
SSBP3-212ENST00000528930 IGKV1D-42A0A075B6H8 117 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 A0A0B4J2E0 115 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.42□□□□□ -1.22
SSBP3-212ENST00000528930 A0A1B0GX12 115 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 PRORSD1PA6NEY8 169 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 AQP7P3A6NL99 342 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 GPR171O14626 319 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 MRASO14807 208 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 LYZL6O75951 148 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 AKR7A3O95154 331 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 NPPAP01160 153 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 OPN1SWP03999 348 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 GPIP06744 558 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 COX5AP20674 150 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 CD247P20963 164 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 IGHV1-2P23083 117 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 PCGF2P35227 344 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 CRYBA2P53672 197 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 FOXG1P55316 489 aaPredicted RBP7.42□□□□□ -1.22
SSBP3-212ENST00000528930 CYLC2Q14093 348 aaPredicted RBP7.42□□□□□ -1.22
SSBP3-212ENST00000528930 OR1Q1Q15612 314 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 OR7A5Q15622 319 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 TAB1Q15750 504 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 NPTX1Q15818 432 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 OCLNQ16625 522 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 NRF1Q16656 503 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 CYP51A1Q16850 503 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 VMACQ2NL98 169 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 BEX5Q5H9J7 111 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 RABL3Q5HYI8 236 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 OTUD3Q5T2D3 398 aaPredicted RBP7.42□□□□□ -1.22
SSBP3-212ENST00000528930 C1orf140Q5VVS0 124 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 FBXW9Q5XUX1 488 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 IL17RELQ6ZVW7 336 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 CCDC80Q76M96 950 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 SNX32Q86XE0 403 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 ZNF100Q8IYN0 542 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms