RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 UPK3AO75631 287 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 PDE5AO76074 875 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 F12P00748 615 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-212ENST00000527887 C8BP07358 591 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 CLDN17P56750 224 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 ROR2Q01974 943 aaKnown RBP12.38□□□□□ -0.43
CAPN1-212ENST00000527887 LOXL1Q08397 574 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-212ENST00000527887 RIPK1Q13546 671 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 ADRM1Q16186 407 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 SWI5Q1ZZU3 235 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 RUNDC3AQ59EK9 446 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 C8orf82Q6P1X6 216 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-212ENST00000527887 PGM2L1Q6PCE3 622 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 DLEU7Q6UYE1 221 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 RANBP3LQ86VV4 465 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-212ENST00000527887 PRIMA1Q86XR5 153 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 ARMC8Q8IUR7 673 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 SLC30A8Q8IWU4 369 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 KDM8Q8N371 416 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 GPR137CQ8N3F9 429 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 C11orf65Q8NCR3 313 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 IL17RDQ8NFM7 739 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 OR4F15Q8NGB8 312 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 PROX1Q92786 737 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 TAAR8Q969N4 342 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 RCN3Q96D15 328 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 SLC41A3Q96GZ6 507 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 LRR1Q96L50 414 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 ALKBH3Q96Q83 286 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-212ENST00000527887 B3GAT1Q9P2W7 334 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 MOKQ9UQ07 419 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 ANGPT4Q9Y264 503 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 PLCE1Q9P212 2302 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 DNHD1Q96M86 4753 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 IGHV4-30-2A0A087WSY4 118 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 IGHV1-18A0A0C4DH31 117 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 ANKRD65E5RJM6 399 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 ATP6V1G2-DDX39BF2Z307 99 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 M0R082 166 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 FBP2O00757 339 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 MRASO14807 208 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 TPST1O60507 370 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 MFN2O95140 757 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 IGKV3-15P01624 115 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 IGLV1-44P01699 117 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 PTNP21246 168 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 HTR2AP28223 471 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 GRPRP30550 384 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 NUDT2P50583 147 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 RGS8P57771 180 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-212ENST00000527887 OR1Q1Q15612 314 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 ARPINQ7Z6K5 226 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 C10orf67Q8IYJ2 551 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 MAPK1IP1LQ8NDC0 245 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 ZNF417Q8TAU3 575 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 UTP4Q969X6 686 aaKnown RBP12.37□□□□□ -0.43
CAPN1-212ENST00000527887 TNFRSF13CQ96RJ3 184 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 ZNF587Q96SQ5 575 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-212ENST00000527887 CPPED1Q9BRF8 314 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-212ENST00000527887 TMEM43Q9BTV4 400 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 ASPNQ9BXN1 380 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 RSPO3Q9BXY4 272 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-212ENST00000527887 AP3M1Q9Y2T2 418 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 NOX1Q9Y5S8 564 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 FKBP7Q9Y680 259 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 ATRQ13535 2644 aa12.37□□□□□ -0.43
CAPN1-212ENST00000527887 IGKV1D-42A0A075B6H8 117 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 A0A0B4J2E0 115 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 A0A1B0GX12 115 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 B9A039 149 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 NDUFS8O00217 210 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 CBR1P16152 277 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 ARR3P36575 388 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 SERPINF1P36955 418 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 PCBP3P57721 371 aaKnown RBP12.36□□□□□ -0.43
CAPN1-212ENST00000527887 SNRPD2P62316 118 aaKnown RBP12.36□□□□□ -0.43
CAPN1-212ENST00000527887 MST1LQ2TV78 715 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 REP15Q6BDI9 236 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 ZNF613Q6PF04 617 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 LINGO2Q7L985 606 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 DHDDSQ86SQ9 333 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 HIPK1Q86Z02 1210 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 UEVLDQ8IX04 471 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 C10orf111Q8N326 155 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 FAM168AQ92567 244 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 ANKRD27Q96NW4 1050 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 IKZF5Q9H5V7 419 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 GPR35Q9HC97 309 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 MYOZ1Q9NP98 299 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-212ENST00000527887 CA10Q9NS85 328 aa12.36□□□□□ -0.43
CAPN1-212ENST00000527887 MRPL39Q9NYK5 338 aaKnown RBP12.36□□□□□ -0.43
CAPN1-212ENST00000527887 A0A096LNT2 108 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 MS4A18H0YCH9 400 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 TRAF3IP2O43734 574 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-212ENST00000527887 MT-ATP6P00846 226 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 ELF3P78545 371 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-212ENST00000527887 ARF1P84077 181 aaKnown RBP12.35□□□□□ -0.43
CAPN1-212ENST00000527887 VLDLRP98155 873 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 IL1RL1Q01638 556 aa12.35□□□□□ -0.43
CAPN1-212ENST00000527887 NAAAQ02083 359 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms