RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 GJB1P08034 283 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 CD14P08571 375 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 SNRNP70P08621 437 aaKnown RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 IGFBP1P08833 259 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 IL6RP08887 468 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 ACP2P11117 423 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 MTHFD2P13995 350 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 FABP4P15090 132 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 GOT1P17174 413 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 GPX2P18283 190 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 SDC1P18827 310 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 NT5EP21589 574 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 PSMB6P28072 239 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 HSD11B1P28845 292 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 CD1CP29017 333 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 HOXA11P31270 313 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 HOXC8P31273 242 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 AKT2P31751 481 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 RPS10P46783 165 aaKnown RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 SLC11A2P49281 568 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 TTPAP49638 278 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 GPR15P49685 360 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 FHITP49789 147 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 SULT1A1P50225 295 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 CCR8P51685 355 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 GEMP55040 296 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 CDH12P55289 794 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 H2BFSP57053 126 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 RPS20P60866 119 aaKnown RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 PRPS1P60891 318 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 SRSF3P84103 164 aaKnown RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 BCL2L1Q07817 233 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 AIMP2Q13155 320 aaKnown RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 ELAVL1Q15717 326 aaKnown RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 FAM189A2Q15884 450 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 SLC10A6Q3KNW5 377 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 XKR6Q5GH73 641 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 SPANXN4Q5MJ08 99 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 WIPI1Q5MNZ9 446 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 COL5A1-AS1Q5SY13 56 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 HENMT1Q5T8I9 393 aaKnown RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 GGNBP1Q5YKI7 109 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 NCR3LG1Q68D85 454 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 SFRP4Q6FHJ7 346 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 OR2A2Q6IF42 318 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 C11orf87Q6NUJ2 197 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 ZNF774Q6NX45 483 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 SFXN4Q6P4A7 337 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 WDR73Q6P4I2 378 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 DOK6Q6PKX4 331 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 PAQR6Q6TCH4 344 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 IL27RAQ6UWB1 636 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 BTNL3Q6UXE8 466 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 CD300LGQ6UXG3 332 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 MEX3BQ6ZN04 569 aaKnown RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 SLC36A1Q7Z2H8 476 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 C5orf24Q7Z6I8 188 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 GRASPQ7Z6J2 395 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 PXKQ7Z7A4 578 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 TAF8Q7Z7C8 310 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 LHFPL4Q7Z7J7 247 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 FBXO16Q8IX29 292 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 APCDD1Q8J025 514 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 JAGN1Q8N5M9 183 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 FAM24BQ8N5W8 94 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 BOLLQ8N9W6 283 aaKnown RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 OR52B6Q8NGF0 335 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 OR5B17Q8NGF7 314 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 OR10Q1Q8NGQ4 319 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 OR8U1Q8NH10 309 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 BRIX1Q8TDN6 353 aaKnown RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 DUSP19Q8WTR2 217 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 ORAOV1Q8WV07 137 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 CCDC107Q8WV48 283 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 TNFAIP8L1Q8WVP5 186 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 TMEM40Q8WWA1 233 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 SMIM12Q96EX1 92 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 CPNE2Q96FN4 548 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 KIRREL1Q96J84 757 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 ZNF75AQ96N20 296 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 YPEL4Q96NS1 127 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 PGLYRP2Q96PD5 576 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 IL4I1Q96RQ9 567 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 SLC22A12Q96S37 553 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 SEPT5Q99719 369 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 C11orf84Q9BUA3 381 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 CSTL1Q9H114 145 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 RERGLQ9H628 205 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 TMEM231Q9H6L2 316 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 MSL2Q9HCI7 577 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 DNAJC4Q9NNZ3 241 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 ADAP2Q9NPF8 381 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 MEPEQ9NQ76 525 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.33□□□□□ -1.56
CD44-225ENST00000527326 SERINC1Q9NRX5 453 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 RLIMQ9NVW2 624 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 LPAR3Q9UBY5 353 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 OR52A1Q9UKL2 312 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 RCE1Q9Y256 329 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 RASD1Q9Y272 281 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms