RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 C10orf53Q8N6V4 93 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 CLEC1AQ8NC01 280 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 APCDD1LQ8NCL9 501 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 RBM15BQ8NDT2 890 aaKnown RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 OR8J3Q8NGG0 315 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 OR8K3Q8NH51 312 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 OR10A6Q8NH74 314 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 NUBPLQ8TB37 319 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 PNPT1Q8TCS8 783 aaKnown RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 GPR151Q8TDV0 419 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 RAB8BQ92930 207 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 ADIPOR1Q96A54 375 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 AURKBQ96GD4 344 aaPredicted RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 SLC35G5Q96KT7 338 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 ZNF354BQ96LW1 612 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 MS4A4EQ96PG1 132 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 OR7D2Q96RA2 312 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 STACQ99469 402 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 SLC39A3Q9BRY0 314 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 THTPAQ9BU02 230 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 TRIM4Q9C037 500 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 OR51I1Q9H343 314 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 PIGUQ9H490 435 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 FOLH1BQ9HBA9 442 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 EQTNQ9NQ60 294 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 EXD2Q9NVH0 621 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 THUMPD1Q9NXG2 353 aaKnown RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 GIN1Q9NXP7 522 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 TAS2R10Q9NYW0 307 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 STMN3Q9NZ72 180 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 ACTR3BQ9P1U1 418 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 TMEM181Q9P2C4 612 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 MRTO4Q9UKD2 239 aaKnown RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 LIPT1Q9Y234 373 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 OR10H1Q9Y4A9 318 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 GMEB1Q9Y692 573 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 DMXL1Q9Y485 3027 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 SPEGQ15772 3267 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 ELOVL7A1L3X0 281 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 TMEM8BA6NDV4 472 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 A6NL46 340 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 C5orf58C9J3I9 102 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 FXYD1O00168 92 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 WWP2O00308 870 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 PRKNO60260 465 aaPredicted RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 GMNNO75496 209 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 STX11O75558 287 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 REM1O75628 298 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 NKX2-2O95096 273 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 PSMG1O95456 288 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 AK1P00568 194 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 HEXAP06865 529 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 SPARCP09486 303 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 TFPTP0C1Z6 253 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 ETFAP13804 333 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 SELLP14151 372 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 ME2P23368 584 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 PSMA4P25789 261 aaKnown RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 ITGA3P26006 1051 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 PSMB10P40306 273 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 MAP3K8P41279 467 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 KHKP50053 298 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 SLC7A2P52569 658 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 PSMD4P55036 377 aaKnown RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 UCNP55089 124 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 MLF1P58340 268 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 MTPNP58546 118 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 DSTNP60981 165 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 TUBA1BP68363 451 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 PSPHP78330 225 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 HTD2P86397 168 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 CDK6Q00534 326 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 LIPEQ05469 1076 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 RBBP4Q09028 425 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 CDC20Q12834 499 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 ZNF155Q12901 538 aaPredicted RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 FADDQ13158 208 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 SELPLGQ14242 412 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 GNA13Q14344 377 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 EBPQ15125 230 aaKnown RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 DUSP5Q16690 384 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 DECR1Q16698 335 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 MEP1AQ16819 746 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 CYP51A1Q16850 503 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 ARHGAP11BQ3KRB8 267 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 GPAT3Q53EU6 434 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 PIGGQ5H8A4 983 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 KRBOX4Q5JUW0 171 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 SAMD4BQ5PRF9 694 aaKnown RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 ATP1A1-AS1Q5TC04 95 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 TNFAIP8L2Q6P589 184 aaPredicted RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 ERICH5Q6P6B1 374 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 PLEKHM3Q6ZWE6 761 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 ZNF771Q7L3S4 317 aaPredicted RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 SHFQ7M4L6 423 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 C16orf62Q7Z3J2 963 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 CALHM3Q86XJ0 350 aa4.02□□□□□ -1.77
USP48-211ENST00000526044 APLFQ8IW19 511 aaPredicted RBP4.02□□□□□ -1.77
USP48-211ENST00000526044 SLC30A8Q8IWU4 369 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms