RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 OR2L5Q8NG80 312 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 FAM222BQ8WU58 562 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 C22orf15Q8WYQ4 148 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 NEIL2Q969S2 332 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 EME1Q96AY2 570 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 S100PBPQ96BU1 408 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 FAF2Q96CS3 445 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 CMTM5Q96DZ9 223 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 CAPNS2Q96L46 248 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 PRAP1Q96NZ9 151 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 CLCC1Q96S66 551 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 ADOQ96SZ5 270 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 LGMNQ99538 433 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 RBBP8Q99708 897 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 KLHDC3Q9BQ90 382 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 TMEM121Q9BTD3 319 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 URM1Q9BTM9 101 aaKnown RBP3.91□□□□□ -1.78
CD44-213ENST00000525209 APOOQ9BUR5 198 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 TRAF4Q9BUZ4 470 aaPredicted RBP3.91□□□□□ -1.78
CD44-213ENST00000525209 BCL2L14Q9BZR8 327 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 CHRNA10Q9GZZ6 450 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 LHX5Q9H2C1 402 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 FZD3Q9NPG1 666 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 CUTCQ9NTM9 273 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 BABAM2Q9NXR7 383 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 B4GALT7Q9UBV7 327 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 PACSIN3Q9UKS6 424 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 PPP1R3CQ9UQK1 317 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 SCML2Q9UQR0 700 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 PDE10AQ9Y233 779 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 MMACHCQ9Y4U1 282 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 TMEM131LA2VDJ0 1609 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 UBN2Q6ZU65 1347 aa3.91□□□□□ -1.78
CD44-213ENST00000525209 NOS1P29475 1434 aa3.9□□□□□ -1.78
CD44-213ENST00000525209 ANKRD50Q9ULJ7 1429 aa3.9□□□□□ -1.78
CD44-213ENST00000525209 KIR2DS5A0A0G2JLQ3 304 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 MYOCOSA0A1B0GUC4 107 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 LRIT2A6NDA9 550 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 hCG_2039718K7EN88 272 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 KIR2DS3K7RE56 304 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 SULT1C2O00338 296 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 TIMM23O14925 209 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 PPP1R2P9O14990 202 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 RGS16O15492 202 aaPredicted RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 NUAK1O60285 661 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 C1orf105O95561 183 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 IGSF6O95976 241 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 NGFRP08138 427 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 HBQ1P09105 142 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 HOXC6P09630 235 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 NQO1P15559 274 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 FASP25445 335 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 CD79BP40259 229 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 VHLP40337 213 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 MAGEA3P43357 314 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 RAP1GDS1P52306 607 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 SPCS3P61009 180 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 RPS18P62269 152 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 LSM6P62312 80 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 MRPS22P82650 360 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 ID2Q02363 134 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 CKAP4Q07065 602 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 RGS1Q08116 209 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 ST3GAL3Q11203 375 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 ITPK1Q13572 414 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 GABRA6Q16445 453 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 ATP6V1FQ16864 119 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 PRTGQ2VWP7 1150 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 TMEM52BQ4KMG9 183 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 GCSAMLQ5JQS6 135 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 FGD3Q5JSP0 725 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 RBM48Q5RL73 367 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 DCAF12Q5T6F0 453 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 SDHAF4Q5VUM1 108 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 RESP18Q5W5W9 173 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 HACD2Q6Y1H2 254 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 USP43Q70EL4 1123 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 AHSA2Q719I0 299 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 ASCL5Q7RTU5 278 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 SMIM15Q7Z3B0 74 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 HSD11B1LQ7Z5J1 315 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 EID3Q8N140 333 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 TMEM251Q8N6I4 163 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 IQCF1Q8N6M8 205 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 TPRX1Q8N7U7 411 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 OR4D9Q8NGE8 314 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 OR5AK3PQ8NH89 298 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 C8orf46Q8TAG6 207 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 MAGEC3Q8TD91 643 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 RNASEH2CQ8TDP1 164 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 ADAMTS16Q8TE57 1224 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 AENQ8WTP8 325 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 SETD7Q8WTS6 366 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 PHLDA1Q8WV24 401 aaPredicted RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 AP3S1Q92572 193 aa3.9□□□□□ -1.79
CD44-213ENST00000525209 ABTB1Q969K4 478 aaPredicted RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 MRPL24Q96A35 216 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 DGCR14Q96DF8 476 aaKnown RBP3.9□□□□□ -1.79
CD44-213ENST00000525209 SGTBQ96EQ0 304 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms