RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MAMLD1Q13495 774 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 FASTKQ14296 549 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 BECN1Q14457 450 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 PDK3Q15120 406 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 STK38Q15208 465 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 RAB35Q15286 201 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 TMED2Q15363 201 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ADPRMQ3LIE5 342 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 FAM98BQ52LJ0 330 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 TEX44Q53QW1 395 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 TIMM23BQ5SRD1 257 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 LRRC38Q5VT99 294 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 TAF3Q5VWG9 929 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 SLC22A10Q63ZE4 541 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 SLC30A6Q6NXT4 461 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 DNAJC24Q6P3W2 148 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 WDR59Q6PJI9 974 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 SYT10Q6XYQ8 523 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 STAC2Q6ZMT1 411 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 GDPGP1Q6ZNW5 385 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 Q6ZT83 130 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 FAM47EQ6ZV65 393 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 Q6ZVH6 145 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 RAPH1Q70E73 1250 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 GLT6D1Q7Z4J2 308 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 VN1R4Q7Z5H5 301 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 PHLDB2Q86SQ0 1253 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 LDB1Q86U70 411 aaPredicted RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 PIANPQ8IYJ0 282 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 TAGAPQ8N103 731 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 GABRG1Q8N1C3 465 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ARHGAP24Q8N264 748 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 MUC15Q8N387 334 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ZNF786Q8N393 782 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 PDILTQ8N807 584 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 PAPD5Q8NDF8 572 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 WFDC9Q8NEX5 89 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 LPCAT1Q8NF37 534 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 OR4M2Q8NGB6 313 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 OR11H4Q8NGC9 324 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 OR4K1Q8NGD4 311 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 OR5M8Q8NGP6 311 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 OR4F5Q8NH21 305 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 OR51Q1Q8NH59 317 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 OR51F2Q8NH61 342 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 MOSPD2Q8NHP6 518 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 VANGL1Q8TAA9 524 aaPredicted RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 TYMSOSQ8TAI1 123 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 LINC01560Q8TB33 94 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 NANPQ8TBE9 248 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 LRRC58Q96CX6 371 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 PIK3IP1Q96FE7 263 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 PDLIM5Q96HC4 596 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 CABS1Q96KC9 395 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 PPM1MQ96MI6 270 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 B9D2Q9BPU9 175 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 FERMT1Q9BQL6 677 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 SNRNP25Q9BV90 132 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 UGT2B28Q9BY64 529 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 HES7Q9BYE0 225 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 DDX47Q9H0S4 455 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 PDCL3Q9H2J4 239 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 PARLQ9H300 379 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 EHD1Q9H4M9 534 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ZNF385DQ9H6B1 395 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ZNF442Q9H7R0 627 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ACTR8Q9H981 624 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 BEX1Q9HBH7 125 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ANKHQ9HCJ1 492 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 LYRM4Q9HD34 91 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 UBE2TQ9NPD8 197 aaPredicted RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 DEPPQ9NTK1 212 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 DDX28Q9NUL7 540 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 DNAJC11Q9NVH1 559 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 IRAK4Q9NWZ3 460 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 MS4A12Q9NXJ0 267 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 COX16Q9P0S2 106 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 B3GAT1Q9P2W7 334 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 COPS7AQ9UBW8 275 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ZNF107Q9UII5 783 aaPredicted RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 DAPK2Q9UIK4 370 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 CRLS1Q9UJA2 301 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 DNAJC12Q9UKB3 198 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ABCG2Q9UNQ0 655 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 LIPT1Q9Y234 373 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 CHKBQ9Y259 395 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 CFL2Q9Y281 166 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.24□□□□□ -2.21
CD44-212ENST00000524922 ATP6V1DQ9Y5K8 247 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ANKRD36A6QL64 1941 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 KMT2AQ03164 3969 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ALPK2Q86TB3 2170 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 LOC105371242A0A075B767 164 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 A0A087WZY1 265 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 C15orf38-AP3S2A0A0A6YYH1 394 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 IGKV1-8A0A0C4DH67 115 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 LOC100653049A0A140TA62 436 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 CCDC189A1A4V9 331 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 CLPSL1A2RUU4 121 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SLC22A20A6NK97 555 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms