RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 IGHV4-30-2A0A087WSY4 118 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 SLC35F4A4IF30 521 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 CPSF4LA6NMK7 179 aaKnown RBP10.76□□□□□ -0.69
VEGFA-223ENST00000523125 IGKV3-15P01624 115 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 CELA3BP08861 270 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 CECR9P0C854 216 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 NQO1P15559 274 aaKnown RBP10.76□□□□□ -0.69
VEGFA-223ENST00000523125 PAX7P23759 505 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 UBE2NP61088 152 aaKnown RBP10.76□□□□□ -0.69
VEGFA-223ENST00000523125 NAAAQ02083 359 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 POU3F1Q03052 451 aaPredicted RBP10.76□□□□□ -0.69
VEGFA-223ENST00000523125 KLF10Q13118 480 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 PMS2P3Q13401 168 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 CYLC2Q14093 348 aaPredicted RBP10.76□□□□□ -0.69
VEGFA-223ENST00000523125 VMACQ2NL98 169 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 CEACAM16Q2WEN9 425 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 UEVLDQ8IX04 471 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 C20orf196Q8IYI0 205 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 GPR137CQ8N3F9 429 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 PIK3C3Q8NEB9 887 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 VANGL1Q8TAA9 524 aaPredicted RBP10.76□□□□□ -0.69
VEGFA-223ENST00000523125 ADAMTS16Q8TE57 1224 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 LRRC58Q96CX6 371 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 LRR1Q96L50 414 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 ZNF426Q9BUY5 554 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 KATNB1Q9BVA0 655 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 ASPNQ9BXN1 380 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 SAR1AQ9NR31 198 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 MED29Q9NX70 200 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 USP22Q9UPT9 525 aa10.76□□□□□ -0.69
VEGFA-223ENST00000523125 FBN1P35555 2871 aaKnown RBP10.76□□□□□ -0.69
VEGFA-223ENST00000523125 ZNF99A8MXY4 864 aaPredicted RBP10.75□□□□□ -0.69
VEGFA-223ENST00000523125 M0R3G1 203 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 SEC14L2O76054 403 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 MT-ATP6P00846 226 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 CRYAAP02489 173 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 TROVE2P10155 538 aaKnown RBP eCLIP10.75□□□□□ -0.69
VEGFA-223ENST00000523125 CBR1P16152 277 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 CALCRP30988 508 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 ARFIP2P53365 341 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 NUDT6P53370 316 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 IL1RL1Q01638 556 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 HGFACQ04756 655 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 PUDPQ08623 228 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 SF3A3Q12874 501 aaKnown RBP eCLIP10.75□□□□□ -0.699e-12■■■■■ 32
VEGFA-223ENST00000523125 RAB35Q15286 201 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 COQ5Q5HYK3 327 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 INTS11Q5TA45 600 aaKnown RBP10.75□□□□□ -0.69
VEGFA-223ENST00000523125 CARD17Q5XLA6 110 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 ZNF627Q7L945 461 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 PXKQ7Z7A4 578 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 C10orf53Q8N6V4 93 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 ZNF525Q8N782 197 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 OR8J3Q8NGG0 315 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 OR5J2Q8NH18 312 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 ZNF583Q96ND8 569 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 PRSS27Q9BQR3 290 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 RHNO1Q9BSD3 238 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 CA10Q9NS85 328 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 B3GNT2Q9NY97 397 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 SLC7A7Q9UM01 511 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 NOX1Q9Y5S8 564 aa10.75□□□□□ -0.69
VEGFA-223ENST00000523125 TRAPPC13A5PLN9 417 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 AKAP8O43823 692 aaKnown RBP10.74□□□□□ -0.69
VEGFA-223ENST00000523125 GPRIN2O60269 458 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 LY6HO94772 140 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 NPPAP01160 153 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 GUCY1A3Q02108 690 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 CHRNB3Q05901 458 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 CAMK2DQ13557 499 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 ADIPOQQ15848 244 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 ZNF74Q16587 644 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 REP15Q6BDI9 236 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 LRRC17Q8N6Y2 441 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 SLC26A7Q8TE54 656 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 NANOS1Q8WY41 292 aaKnown RBP10.74□□□□□ -0.69
VEGFA-223ENST00000523125 FBXO17Q96EF6 278 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 ZNF75AQ96N20 296 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 TAS2R5Q9NYW4 299 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 ZNF224Q9NZL3 707 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 ADAM21Q9UKJ8 722 aa10.74□□□□□ -0.69
VEGFA-223ENST00000523125 MALRD1Q5VYJ5 2156 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 LOC100653049A0A140TA62 436 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 C11orf98E9PRG8 122 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 MRASO14807 208 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 KRT34O76011 436 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 CH25HO95992 272 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 F12P00748 615 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-223ENST00000523125 ADORA3P0DMS8 318 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 IFNGR1P15260 489 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 TNFRSF1BP20333 461 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 AHCYP23526 432 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 SERPINF1P36955 418 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 IDH3GP51553 393 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-223ENST00000523125 EFNA4P52798 201 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 DSCR9P59020 149 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 PPP2R2BQ00005 443 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 ZP4Q12836 540 aa10.73□□□□□ -0.69
VEGFA-223ENST00000523125 TTC33Q6PID6 262 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-223ENST00000523125 CLEC2AQ6UVW9 174 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms