RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SLC35F4A4IF30 521 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 IGLV1-44P01699 117 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 HOXB1P14653 301 aaPredicted RBP17.99■□□□□ 0.47
SDCBP-209ENST00000522243 CBR1P16152 277 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 AHCYP23526 432 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 PAX7P23759 505 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 CAPZA2P47755 286 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 EFNA4P52798 201 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 DSCR9P59020 149 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 SCAIQ8N9R8 606 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 ANKK1Q8NFD2 765 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 TSPEARQ8WU66 669 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 NANOS1Q8WY41 292 aaKnown RBP17.99■□□□□ 0.47
SDCBP-209ENST00000522243 FAM168AQ92567 244 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 TMEM43Q9BTV4 400 aa17.99■□□□□ 0.47
SDCBP-209ENST00000522243 MRPL39Q9NYK5 338 aaKnown RBP17.99■□□□□ 0.47
SDCBP-209ENST00000522243 C11orf98E9PRG8 122 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 FBP2O00757 339 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 CHP2O43745 196 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 IGKV3-15P01624 115 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 CD247P20963 164 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 PCGF2P35227 344 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 SERPINF1P36955 418 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 PUDPQ08623 228 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 NPRL3Q12980 569 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 CAMK2DQ13557 499 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 ZNF613Q6PF04 617 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 WDR88Q6ZMY6 472 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 C20orf196Q8IYI0 205 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 SLC26A7Q8TE54 656 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 TAMM41Q96BW9 452 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 SORCS2Q96PQ0 1159 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 SIKE1Q9BRV8 207 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 YLPM1P49750 1951 aaKnown RBP17.98■□□□□ 0.47
SDCBP-209ENST00000522243 TLN2Q9Y4G6 2542 aa17.98■□□□□ 0.47
SDCBP-209ENST00000522243 ZNF726A6NNF4 738 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 ZNF99A8MXY4 864 aaPredicted RBP17.97■□□□□ 0.47
SDCBP-209ENST00000522243 PLPP3O14495 311 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 TLX2O43763 284 aaPredicted RBP17.97■□□□□ 0.47
SDCBP-209ENST00000522243 FMO6PO60774 539 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 THY1P04216 161 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 C8BP07358 591 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 OR4A8P0C604 315 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 GZMMP51124 257 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 SNRPD2P62316 118 aaKnown RBP17.97■□□□□ 0.47
SDCBP-209ENST00000522243 HGFACQ04756 655 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 ADIPOQQ15848 244 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 C3orf36Q3SXR2 165 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 SWT1Q5T5J6 900 aaKnown RBP17.97■□□□□ 0.47
SDCBP-209ENST00000522243 METTL21CQ5VZV1 264 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 NHLRC1Q6VVB1 395 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 LINC00114Q6XXX2 140 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 PATL1Q86TB9 770 aaKnown RBP17.97■□□□□ 0.47
SDCBP-209ENST00000522243 MDP1Q86V88 176 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 TSPYL5Q86VY4 417 aaPredicted RBP17.97■□□□□ 0.47
SDCBP-209ENST00000522243 OR5J2Q8NH18 312 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 ADAMTS16Q8TE57 1224 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 C10orf105Q8TEF2 133 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 VRK1Q99986 396 aaPredicted RBP17.97■□□□□ 0.47
SDCBP-209ENST00000522243 NOX1Q9Y5S8 564 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 ABCA1O95477 2261 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 ABCA2Q9BZC7 2435 aa17.97■□□□□ 0.47
SDCBP-209ENST00000522243 KPNA4O00629 521 aaPredicted RBP17.96■□□□□ 0.47
SDCBP-209ENST00000522243 LYPD3O95274 346 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 CH25HO95992 272 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 F12P00748 615 aaPredicted RBP17.96■□□□□ 0.47
SDCBP-209ENST00000522243 ADORA3P0DMS8 318 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 SLC25A16P16260 332 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 LOXL1Q08397 574 aaPredicted RBP17.96■□□□□ 0.47
SDCBP-209ENST00000522243 VMACQ2NL98 169 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 TMEM249Q2WGJ8 235 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 RABL3Q5HYI8 236 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 NANOGP8Q6NSW7 305 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 TTC33Q6PID6 262 aaPredicted RBP17.96■□□□□ 0.47
SDCBP-209ENST00000522243 SLC46A3Q7Z3Q1 461 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 SLC30A8Q8IWU4 369 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 FAM169BQ8N8A8 192 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 ANKS4BQ8N8V4 417 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 OR6N1Q8NGY5 312 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 TNFRSF13CQ96RJ3 184 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 MDFIQ99750 246 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 NANOGQ9H9S0 305 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 SLC7A7Q9UM01 511 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 POFUT2Q9Y2G5 429 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 ZANQ9Y493 2812 aa17.96■□□□□ 0.47
SDCBP-209ENST00000522243 B9A039 149 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 OR6A2O95222 327 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 MT-ATP6P00846 226 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 HLA-HP01893 362 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 ARR3P36575 388 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 BIDP55957 195 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 PIGFQ07326 219 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 CYLC2Q14093 348 aaPredicted RBP17.95■□□□□ 0.46
SDCBP-209ENST00000522243 TRMT5Q32P41 509 aaKnown RBP17.95■□□□□ 0.46
SDCBP-209ENST00000522243 INTS11Q5TA45 600 aaKnown RBP17.95■□□□□ 0.46
SDCBP-209ENST00000522243 ZNF813Q6ZN06 617 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 PXKQ7Z7A4 578 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 LRRC17Q8N6Y2 441 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 OR4F15Q8NGB8 312 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 ULBP2Q9BZM5 246 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms