RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ADAMTS15Q8TE58 950 aa7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 CCL17Q92583 94 aa7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 CDKL2Q92772 493 aa7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 KCNA7Q96RP8 456 aa7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 SDF2Q99470 211 aa7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 NAA11Q9BSU3 229 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 MRI1Q9BV20 369 aa7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 LINC00470Q9BZP3 86 aa7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 C16orf95Q9H693 158 aa7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 LZTFL1Q9NQ48 299 aa7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZNF346Q9UL40 294 aaKnown RBP7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 POLR3HQ9Y535 204 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 TIMM22Q9Y584 194 aa7.42□□□□□ -1.22
TRAPPC9-212ENST00000521944 AGAP5A6NIR3 686 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 LIPT2A6NK58 231 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 AQP7P3A6NL99 342 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 ANKRD28O15084 1053 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 PDPK1O15530 556 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 UGT2B17O75795 530 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 CSTAP01040 98 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 IGHV2-70P01814 119 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZNF250P15622 560 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 RYKP34925 604 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 SH3BGRP55822 239 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 RPL15P61313 204 aaKnown RBP7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 ERVS71-1P61550 626 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 PIGFQ07326 219 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 CEACAM7Q14002 265 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 KIAA0040Q15053 153 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 TSTQ16762 297 aaKnown RBP7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 HFEQ30201 348 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 PCGF3Q3KNV8 242 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 UNC50Q53HI1 259 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 PHYHD1Q5SRE7 291 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 NIPAL3Q6P499 406 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 GPAT4Q86UL3 456 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZNF584Q8IVC4 421 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 PAQR4Q8N4S7 273 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 METTL6Q8TCB7 284 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 ST7LQ8TDW4 575 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 PYROXD1Q8WU10 500 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 DYRK2Q92630 601 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZG16BQ96DA0 208 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 TIMD4Q96H15 378 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 NMUR2Q9GZQ4 415 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 PIF1Q9H611 641 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 GPR35Q9HC97 309 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 NOX4Q9NPH5 578 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 OSGIN1Q9UJX0 560 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 NFU1Q9UMS0 254 aa7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 SPIN1Q9Y657 262 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC9-212ENST00000521944 TMED7-TICAM2A0A0A6YYA0 188 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 WI2-2373I1.2A0A1W2PRP0 233 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 ISPDA4D126 451 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 F5H0A9 414 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 PGRMC1O00264 195 aaKnown RBP7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZNF208O43345 1280 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 IGHV4-59P01825 116 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 FKBP2P26885 142 aaKnown RBP7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 FOXA1P55317 472 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 TEKQ02763 1124 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 RASA2Q15283 850 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 CEACAM16Q2WEN9 425 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 TRMT5Q32P41 509 aaKnown RBP7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 PRAMEF8Q5VWM4 474 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 PRAMEF7Q5VXH5 474 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 NOXRED1Q6NXP6 359 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 TMEM154Q6P9G4 183 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 CCDC91Q7Z6B0 441 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 ACTRT1Q8TDG2 376 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 MARS2Q96GW9 593 aaKnown RBP7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZNF764Q96H86 408 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 PBKQ96KB5 322 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 ZNF382Q96SR6 550 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 SAP30LQ9HAJ7 183 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 PATZ1Q9HBE1 687 aaKnown RBP7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 PRR13Q9NZ81 148 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 TMED7Q9Y3B3 224 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 CCL27Q9Y4X3 112 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 NOX1Q9Y5S8 564 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 POMT1Q9Y6A1 747 aa7.4□□□□□ -1.22
TRAPPC9-212ENST00000521944 CLDN24A6NM45 220 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 A8MT66 165 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 C3orf84H3BNL1 204 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 AP3D1O14617 1153 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 TBX19O60806 448 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 SLC43A1O75387 559 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 IGHV1-46P01743 117 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 SBK2P0C263 348 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 THRBP10828 461 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 CAPZA2P47755 286 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 IDH2P48735 452 aaKnown RBP7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 AQP5P55064 265 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 PDE7AQ13946 482 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 OR7A5Q15622 319 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 GPR68Q15743 365 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 KCNMB1Q16558 191 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 SPDYAQ5MJ70 313 aa7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 GKAP1Q5VSY0 366 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC9-212ENST00000521944 ZNF774Q6NX45 483 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms