RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ZNF83P51522 516 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 ZP4Q12836 540 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 KRT72Q14CN4 511 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 ADAM5Q6NVV9 412 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 HIST3H2AQ7L7L0 130 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 OFCC1Q8IZS5 231 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 CCDC197Q8NCU1 140 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 KBTBD8Q8NFY9 601 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 NEUROG1Q92886 237 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 HIST1H2ACQ93077 130 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 HS6ST2Q96MM7 605 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 CCL19Q99731 98 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 C1QTNF6Q9BXI9 259 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 GPR35Q9HC97 309 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 MAN2C1Q9NTJ4 1040 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 BEX4Q9NWD9 120 aaPredicted RBP18.09■□□□□ 0.49
TRIM35-203ENST00000521253 RHCGQ9UBD6 479 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 RPS6KA6Q9UK32 745 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 AMDHD2Q9Y303 409 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 MED31Q9Y3C7 131 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 VPS13CQ709C8 3753 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 ABCD4O14678 606 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 IGF2P01344 180 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 HSD17B1P14061 328 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 IFNGR1P15260 489 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 TCN1P20061 433 aaPredicted RBP18.08■□□□□ 0.48
TRIM35-203ENST00000521253 IFNA8P32881 189 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 PRPS1P60891 318 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 FXNQ16595 210 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 TBRG1Q3YBR2 411 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 SAMD4BQ5PRF9 694 aaKnown RBP18.08■□□□□ 0.48
TRIM35-203ENST00000521253 PHYHD1Q5SRE7 291 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 KLHL17Q6TDP4 642 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 TMEM108Q6UXF1 575 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 NANOGNBQ7Z5D8 188 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 C20orf196Q8IYI0 205 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 ZNF611Q8N823 705 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 ANKK1Q8NFD2 765 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 BCL2L2Q92843 193 aaPredicted RBP18.08■□□□□ 0.48
TRIM35-203ENST00000521253 PIGTQ969N2 578 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 ZNF837Q96EG3 531 aaPredicted RBP18.08■□□□□ 0.48
TRIM35-203ENST00000521253 SGTBQ96EQ0 304 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 CDRT15Q96T59 188 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 FNDC11Q9BVV2 318 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 CRLF2Q9HC73 371 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 DCAF13Q9NV06 445 aaKnown RBP18.08■□□□□ 0.48
TRIM35-203ENST00000521253 CD300AQ9UGN4 299 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 ADAM21Q9UKJ8 722 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 ALPK2Q86TB3 2170 aa18.08■□□□□ 0.48
TRIM35-203ENST00000521253 ZNF726A6NNF4 738 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 M0R1B8 84 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 M0R3G1 203 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 RNF13O43567 381 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 PIP5K1CO60331 668 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 GMNNO75496 209 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 OR7A10O76100 309 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 FUT1P19526 365 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 CD40P25942 277 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 SH3BGRP55822 239 aaPredicted RBP18.07■□□□□ 0.48
TRIM35-203ENST00000521253 BIDP55957 195 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 LSM11P83369 360 aaKnown RBP eCLIP18.07■□□□□ 0.48
TRIM35-203ENST00000521253 MXRA7P84157 204 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 CAMK2DQ13557 499 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 CEACAM16Q2WEN9 425 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 KLHL24Q6TFL4 600 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 C16orf89Q6UX73 402 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 TSEN54Q7Z6J9 526 aaKnown RBP18.07■□□□□ 0.48
TRIM35-203ENST00000521253 DEFB107AQ8IZN7 70 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 PIP5K1AQ99755 562 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 NELFAQ9H3P2 528 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 NDE1Q9NXR1 346 aa18.07■□□□□ 0.48
TRIM35-203ENST00000521253 RAI1Q7Z5J4 1906 aaPredicted RBP18.06■□□□□ 0.48
TRIM35-203ENST00000521253 A0A096LPE4 126 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 A0A1W2PPZ6 126 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 SHISA9B4DS77 424 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 BLOC1S5-TXNDC5H3BN57 136 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 PRSS23O95084 383 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 WNT11O96014 354 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 PTAFRP25105 342 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 MSX2P35548 267 aaPredicted RBP18.06■□□□□ 0.48
TRIM35-203ENST00000521253 MNAT1P51948 309 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 ARF1P84077 181 aaKnown RBP18.06■□□□□ 0.48
TRIM35-203ENST00000521253 SPOCK1Q08629 439 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 TRAM2Q15035 370 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 ZNF672Q499Z4 452 aaPredicted RBP18.06■□□□□ 0.48
TRIM35-203ENST00000521253 C1QTNF12Q5T7M4 302 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 ANKRD16Q6P6B7 361 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 SLC35D2Q76EJ3 337 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 FAM86B1Q8N7N1 296 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 LIPHQ8WWY8 451 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 IGFBPL1Q8WX77 278 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 LRR1Q96L50 414 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 GORASP2Q9H8Y8 452 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 OBP2BQ9NPH6 170 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 SAMD4AQ9UPU9 718 aaKnown RBP18.06■□□□□ 0.48
TRIM35-203ENST00000521253 MAGED1Q9Y5V3 778 aaPredicted RBP18.06■□□□□ 0.48
TRIM35-203ENST00000521253 ENPP4Q9Y6X5 453 aa18.06■□□□□ 0.48
TRIM35-203ENST00000521253 RPL18Q07020 188 aaKnown RBP18.05■□□□□ 0.48
TRIM35-203ENST00000521253 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
TRIM35-203ENST00000521253 OR6N1Q8NGY5 312 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms