RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SMAD9O15198 467 aaKnown RBP9.25□□□□□ -0.93
MCF2-209ENST00000520602 GPRIN2O60269 458 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 MT-ND4P03905 459 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 MSL3P1P0C860 447 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 GSTT2BP0CG30 244 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 STOMP27105 288 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 ABCD3P28288 659 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 SDHAP31040 664 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 ZNF117Q03924 483 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 FUT7Q11130 342 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 EFR3AQ14156 821 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 ACKR1Q16570 336 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 ZNF74Q16587 644 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 FAM69AQ5T7M9 428 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 ZNF782Q6ZMW2 699 aaPredicted RBP9.25□□□□□ -0.93
MCF2-209ENST00000520602 LRRC69Q6ZNQ3 347 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 LINC00346Q8IVM7 164 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 UBQLNLQ8IYU4 475 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 DNAAF1Q8NEP3 725 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 GPR119Q8TDV5 335 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 AKAP1Q92667 903 aaKnown RBP eCLIP9.25□□□□□ -0.93
MCF2-209ENST00000520602 CTHRC1Q96CG8 243 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 PELI1Q96FA3 418 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 ZNF486Q96H40 463 aaPredicted RBP9.25□□□□□ -0.93
MCF2-209ENST00000520602 EMC6Q9BV81 110 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 WWTR1Q9GZV5 400 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 NTMQ9P121 344 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 MEIS3P1A6NDR6 274 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 FRG2CA6NGY1 282 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 A8MVM7 634 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 DVL2O14641 736 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 SRMP19623 302 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 OTX2P32243 289 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 CDKN2AP42771 156 aaKnown RBP9.25□□□□□ -0.93
MCF2-209ENST00000520602 GPR50Q13585 617 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 CDK5R1Q15078 307 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.25□□□□□ -0.93
MCF2-209ENST00000520602 ATAD3CQ5T2N8 411 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 SYNPRQ8TBG9 265 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 SLC35B4Q969S0 331 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 DDIT4LQ96D03 193 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 TXNDC15Q96J42 360 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 DCLRE1CQ96SD1 692 aaKnown RBP9.25□□□□□ -0.93
MCF2-209ENST00000520602 MED18Q9BUE0 208 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 OR10A4Q9H209 315 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 MMP25Q9NPA2 562 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 WNT16Q9UBV4 365 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 ZNF223Q9UK11 482 aaPredicted RBP9.25□□□□□ -0.93
MCF2-209ENST00000520602 TRAV18A0A075B6X5 111 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 TGFBR3LH3BV60 316 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 EIF4EP06730 217 aaKnown RBP9.25□□□□□ -0.93
MCF2-209ENST00000520602 CDC20Q12834 499 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 SELENBP1Q13228 472 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 EEF1A1P5Q5VTE0 462 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 METAP1DQ6UB28 335 aaPredicted RBP9.25□□□□□ -0.93
MCF2-209ENST00000520602 SSX6Q7RTT6 188 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 ZNF101Q8IZC7 436 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 NAT6Q93015 286 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 TAAR8Q969N4 342 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 TRIM63Q969Q1 353 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 KCTD12Q96CX2 325 aaKnown RBP9.25□□□□□ -0.93
MCF2-209ENST00000520602 GINS4Q9BRT9 223 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 LAT2Q9GZY6 243 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 TTYH1Q9H313 450 aaPredicted RBP9.25□□□□□ -0.93
MCF2-209ENST00000520602 GALNT9Q9HCQ5 603 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 ITGB1BP2Q9UKP3 347 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 MOKQ9UQ07 419 aa9.25□□□□□ -0.93
MCF2-209ENST00000520602 HMX3A6NHT5 357 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 GATBO75879 557 aaKnown RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 RBBP9O75884 186 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 H2AFB2P0C5Z0 115 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 ZNF20P17024 532 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 EVI2BP34910 448 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 DUSP3P51452 185 aaPredicted RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 P2RX1P51575 399 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 SLC37A1P57057 533 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 C17orf67Q0P5P2 114 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 SNTA1Q13424 505 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 TRIM61Q5EBN2 209 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 LSMEM1Q8N8F7 131 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 SMIM19Q96E16 107 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 FYTTD1Q96QD9 318 aaKnown RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 MIXL1Q9H2W2 232 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 WDR76Q9H967 626 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 EIF3KQ9UBQ5 218 aaKnown RBP9.24□□□□□ -0.93
MCF2-209ENST00000520602 ZNF69Q9UC07 566 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 DKKL1Q9UK85 242 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 SHISA8B8ZZ34 492 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 SIGLEC6O43699 453 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 IGHA1P01876 353 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 NGFRP08138 427 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 CRABP1P29762 137 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 CCL7P80098 99 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 HSF2Q03933 536 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 SLC16A9Q7RTY1 509 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 EGFL6Q8IUX8 553 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 OR1N1Q8NGS0 311 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 OR13C3Q8NGS6 347 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 ITFG2Q969R8 447 aa9.24□□□□□ -0.93
MCF2-209ENST00000520602 ZNF775Q96BV0 537 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms