RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ALDH3B1P43353 468 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 RPS5P46782 204 aaKnown RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 TNFSF10P50591 281 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 AIF1P55008 147 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 PKNOX1P55347 436 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 AP1S2P56377 157 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 KCNK10P57789 538 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 RPS27AP62979 156 aaKnown RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF33AQ06730 810 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR1C1Q15619 314 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC39A12Q504Y0 691 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 IFI44LQ53G44 452 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 XKR4Q5GH76 650 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 LDLRAP1Q5SW96 308 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 CLVS2Q5SYC1 327 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 SYT6Q5T7P8 510 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 PRAMEF8Q5VWM4 474 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 TIGD3Q6B0B8 471 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 LCN8Q6JVE9 175 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF544Q6NX49 715 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 PNCKQ6P2M8 343 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 NEK5Q6P3R8 708 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 TTC33Q6PID6 262 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 CYHR1Q6ZMK1 362 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF767PQ75MW2 155 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 TIPARPQ7Z3E1 657 aaKnown RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 NUFIP2Q7Z417 695 aaKnown RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 MARCH9Q86YJ5 346 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 NUDCD3Q8IVD9 361 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 CDH26Q8IXH8 852 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF786Q8N393 782 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 CBR4Q8N4T8 237 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 LRRC52Q8N7C0 313 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF781Q8N8C0 355 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 FNDC5Q8NAU1 212 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 CHDHQ8NE62 594 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 BPIFB6Q8NFQ5 453 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 NDNFQ8TB73 568 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 BLOC1S5Q8TDH9 187 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 RXFP2Q8WXD0 754 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC7A6Q92536 515 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 NCLNQ969V3 563 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 RCN3Q96D15 328 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 CENPNQ96H22 339 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 HPDLQ96IR7 371 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 PEBP4Q96S96 227 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 COQ7Q99807 217 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 MTG1Q9BT17 334 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 ROGDIQ9GZN7 287 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 RSPH9Q9H1X1 276 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 ADNPQ9H2P0 1102 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR51B5Q9H339 312 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 DSN1Q9H410 356 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 DUSP21Q9H596 190 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 NIPAL2Q9H841 368 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 COG4Q9H9E3 785 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 POLE4Q9NR33 117 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 C20orf96Q9NUD7 363 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 GLTPQ9NZD2 209 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 BFARQ9NZS9 450 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 OPTCQ9UBM4 332 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 MARCOQ9UEW3 520 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 ADAM28Q9UKQ2 775 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 TBC1D24Q9ULP9 559 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF175Q9Y473 711 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 SMAD5-AS1Q9Y6J3 95 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 RLFQ13129 1914 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRIP11Q15643 1979 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 SSC5DA1L4H1 1573 aa2.61□□□□□ -1.99
HMGB1P41-201ENST00000520234 IGHV3-16A0A0C4DH30 117 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 LOC100653049A0A140TA62 436 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 A0A1W2PQ72 361 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 A0A1W2PRV1 198 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SMIM30A4D0T7 59 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF724A8MTY0 619 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 PSMD3O43242 534 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 CACNG3O60359 315 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 DFNA5O60443 496 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SH3BGRLO75368 114 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 CSO75390 466 aaKnown RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 UGT2B17O75795 530 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 KRT34O76011 436 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SUPT7LO94864 414 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR5F1O95221 314 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 CLIC3O95833 236 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 HPP00738 406 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC4A1P02730 911 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 ALPPP05187 535 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 S100A6P06703 90 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SERPINF2P08697 491 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 RPS17P08708 135 aaKnown RBP2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 IQCF3P0C7M6 154 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 KCNE1P15382 129 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 GPX3P22352 226 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 HLA-DMAP28067 261 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SERPINB1P30740 379 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 HOXA6P31267 233 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 SDC4P31431 198 aa2.6□□□□□ -1.99
HMGB1P41-201ENST00000520234 RFC2P35250 354 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms