RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 NOL11Q9H8H0 719 aaKnown RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 CAB39LQ9H9S4 337 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PLAC1Q9HBJ0 212 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 SERINC1Q9NRX5 453 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PLEK2Q9NYT0 353 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 TAS2R7Q9NYW3 318 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PDP1Q9P0J1 537 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 NUP50Q9UKX7 468 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PAIP2BQ9ULR5 123 aaKnown RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 ICAM5Q9UMF0 924 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 MTO1Q9Y2Z2 717 aaKnown RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 USH1CQ9Y6N9 552 aa4.2□□□□□ -1.74
SDCBP-207ENST00000520168 TET2Q6N021 2002 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-207ENST00000520168 PLXNB1O43157 2135 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 OR6C65A6NJZ3 312 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 C9JVG2 144 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 STX16-NPEPL1H3BU86 382 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 OR7A17O14581 309 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 STX16O14662 325 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 PPIHO43447 177 aaKnown RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 PLPP2O43688 288 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 EFNA2O43921 213 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 PCDH7O60245 1069 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 EIF4E2O60573 245 aaKnown RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 EIF1BO60739 113 aaKnown RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 NME6O75414 186 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 DNAJC8O75937 253 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 KCNK2O95069 426 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ECDO95905 644 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 PDYNP01213 254 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 IGKV1D-16P01601 117 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 IGKV3-15P01624 115 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 IGLV1-44P01699 117 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 JUNP05412 331 aaKnown RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ADRA2AP08913 450 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 CECR9P0C854 216 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 MAP3K8P41279 467 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ETV4P43268 484 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 MTNR1AP48039 350 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 RASSF2P50749 326 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ATP4BP51164 291 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 PRKAA2P54646 552 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 RPS23P62266 143 aaKnown RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 CD83Q01151 205 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 TEKQ02763 1124 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ACSM2AQ08AH3 577 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ZNF763Q0D2J5 394 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 TRAF3Q13114 568 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 HLXQ14774 488 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 TAF9Q16594 264 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 NKPD1Q17RQ9 610 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 C2orf68Q2NKX9 166 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 CCDC153Q494R4 210 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 LRRC23Q53EV4 343 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 SYT14P1Q58G82 188 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 CEP78Q5JTW2 689 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 OTUD3Q5T2D3 398 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 KANK2Q63ZY3 851 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 OLFML2AQ68BL7 652 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ACSM2BQ68CK6 577 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 RAB12Q6IQ22 244 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 LEG1Q6P5S2 330 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ANKRD16Q6P6B7 361 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 VHLLQ6RSH7 139 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ZYG11AQ6WRX3 759 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 NUDCD3Q8IVD9 361 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 C10orf67Q8IYJ2 551 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 SPARTQ8N0X7 666 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 CCDC63Q8NA47 563 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 GATSQ8NAP1 163 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 GPR119Q8TDV5 335 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ZNF483Q8TF39 744 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 PIK3R3Q92569 461 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 TMEM45BQ96B21 275 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 TUBGCP3Q96CW5 907 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 MS4A4EQ96PG1 132 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 RBM4BQ9BQ04 359 aaKnown RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 SIKE1Q9BRV8 207 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 NARFLQ9H6Q4 476 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 MIEF1Q9NQG6 463 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 SAR1AQ9NR31 198 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ZNF275Q9NSD4 429 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 THAP1Q9NVV9 213 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 TMEM45AQ9NWC5 275 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 GIN1Q9NXP7 522 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 TREM2Q9NZC2 230 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 SLC17A7Q9P2U7 560 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 MID2Q9UJV3 735 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 ZNF346Q9UL40 294 aaKnown RBP4.19□□□□□ -1.74
SDCBP-207ENST00000520168 TRAPPC4Q9Y296 219 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 HDGFL3Q9Y3E1 203 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 CMAHPQ9Y471 501 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 CAPN7Q9Y6W3 813 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 DNAH3Q8TD57 4116 aa4.19□□□□□ -1.74
SDCBP-207ENST00000520168 LOC100653049A0A140TA62 436 aa4.18□□□□□ -1.74
SDCBP-207ENST00000520168 TMEM129A0AVI4 362 aa4.18□□□□□ -1.74
SDCBP-207ENST00000520168 GXYLT2A0PJZ3 443 aa4.18□□□□□ -1.74
SDCBP-207ENST00000520168 SH3PXD2BA1X283 911 aa4.18□□□□□ -1.74
SDCBP-207ENST00000520168 C5orf63A6NC05 138 aa4.18□□□□□ -1.74
SDCBP-207ENST00000520168 ANKRD65E5RJM6 399 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms