RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 SNX32Q86XE0 403 aa22.01■■□□□ 1.11
VEGFA-220ENST00000519767 PTOV1Q86YD1 416 aa22.01■■□□□ 1.11
VEGFA-220ENST00000519767 C20orf196Q8IYI0 205 aa22.01■■□□□ 1.11
VEGFA-220ENST00000519767 C10orf53Q8N6V4 93 aa22.01■■□□□ 1.11
VEGFA-220ENST00000519767 NUP37Q8NFH4 326 aa22.01■■□□□ 1.11
VEGFA-220ENST00000519767 MDFIQ99750 246 aa22.01■■□□□ 1.11
VEGFA-220ENST00000519767 B3GAT2Q9NPZ5 323 aa22.01■■□□□ 1.11
VEGFA-220ENST00000519767 MRPL39Q9NYK5 338 aaKnown RBP22.01■■□□□ 1.11
VEGFA-220ENST00000519767 NDUFS8O00217 210 aa22■■□□□ 1.11
VEGFA-220ENST00000519767 IFNA2P01563 188 aa22■■□□□ 1.11
VEGFA-220ENST00000519767 OR4A8P0C604 315 aa22■■□□□ 1.11
VEGFA-220ENST00000519767 USF1P22415 310 aaPredicted RBP22■■□□□ 1.11
VEGFA-220ENST00000519767 EFNB3Q15768 340 aa22■■□□□ 1.11
VEGFA-220ENST00000519767 LINC00114Q6XXX2 140 aa22■■□□□ 1.11
VEGFA-220ENST00000519767 PXKQ7Z7A4 578 aa22■■□□□ 1.11
VEGFA-220ENST00000519767 PATL1Q86TB9 770 aaKnown RBP22■■□□□ 1.11
VEGFA-220ENST00000519767 SMYD1Q8NB12 490 aa22■■□□□ 1.11
VEGFA-220ENST00000519767 NANOS1Q8WY41 292 aaKnown RBP22■■□□□ 1.11
VEGFA-220ENST00000519767 MCHR1Q99705 422 aa22■■□□□ 1.11
VEGFA-220ENST00000519767 ZNF385DQ9H6B1 395 aa22■■□□□ 1.11
VEGFA-220ENST00000519767 MYOZ1Q9NP98 299 aaPredicted RBP22■■□□□ 1.11
VEGFA-220ENST00000519767 USP22Q9UPT9 525 aa22■■□□□ 1.11
VEGFA-220ENST00000519767 CR1P17927 2039 aa22■■□□□ 1.11
VEGFA-220ENST00000519767 ZNF726A6NNF4 738 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 M0R3G1 203 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 HPRP00739 348 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 PDLIM4P50479 330 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 PUDPQ08623 228 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 ADIPOQQ15848 244 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 DUSP7Q16829 419 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 NHLRC1Q6VVB1 395 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 SLC46A3Q7Z3Q1 461 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 ZNF837Q96EG3 531 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-220ENST00000519767 ARHGDIGQ99819 225 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 WFDC6Q9BQY6 131 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 PLK3Q9H4B4 646 aa21.99■■□□□ 1.11
VEGFA-220ENST00000519767 KAT8Q9H7Z6 458 aaKnown RBP21.99■■□□□ 1.11
VEGFA-220ENST00000519767 ARGLU1Q9NWB6 273 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-220ENST00000519767 CHD3Q12873 2000 aaKnown RBP21.98■■□□□ 1.11
VEGFA-220ENST00000519767 SLC35F4A4IF30 521 aa21.98■■□□□ 1.11
VEGFA-220ENST00000519767 PLPP3O14495 311 aa21.98■■□□□ 1.11
VEGFA-220ENST00000519767 HLA-DOBP13765 273 aa21.98■■□□□ 1.11
VEGFA-220ENST00000519767 POU3F1Q03052 451 aaPredicted RBP21.98■■□□□ 1.11
VEGFA-220ENST00000519767 NFYCQ13952 458 aa21.98■■□□□ 1.11
VEGFA-220ENST00000519767 CHRFAM7AQ494W8 412 aa21.98■■□□□ 1.11
VEGFA-220ENST00000519767 INTS11Q5TA45 600 aaKnown RBP21.98■■□□□ 1.11
VEGFA-220ENST00000519767 CYB5R2Q6BCY4 276 aa21.98■■□□□ 1.11
VEGFA-220ENST00000519767 RETREG3Q86VR2 466 aa21.98■■□□□ 1.11
VEGFA-220ENST00000519767 THOC1Q96FV9 657 aaKnown RBP21.98■■□□□ 1.11
VEGFA-220ENST00000519767 MOGAT1Q96PD6 335 aa21.98■■□□□ 1.11
VEGFA-220ENST00000519767 VRK1Q99986 396 aaPredicted RBP21.98■■□□□ 1.11
VEGFA-220ENST00000519767 ZNF442Q9H7R0 627 aa21.98■■□□□ 1.11
VEGFA-220ENST00000519767 STAB1Q9NY15 2570 aa21.98■■□□□ 1.11
VEGFA-220ENST00000519767 DNHD1Q96M86 4753 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 CHP2O43745 196 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 EDF1O60869 148 aaKnown RBP21.97■■□□□ 1.11
VEGFA-220ENST00000519767 VIMP08670 466 aaKnown RBP21.97■■□□□ 1.11
VEGFA-220ENST00000519767 AHCYP23526 432 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 CALCRP30988 508 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 IDH3GP51553 393 aaPredicted RBP21.97■■□□□ 1.11
VEGFA-220ENST00000519767 MTPNP58546 118 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 C6orf52Q5T4I8 152 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 CARD17Q5XLA6 110 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 PODNL1Q6PEZ8 512 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 VHLLQ6RSH7 139 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 ZNF627Q7L945 461 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 TXNDC15Q96J42 360 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 EMC6Q9BV81 110 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 RAB1BQ9H0U4 201 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 NPHS2Q9NP85 383 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 POFUT2Q9Y2G5 429 aa21.97■■□□□ 1.11
VEGFA-220ENST00000519767 LOC390937A0A1W2PQ73 354 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 OR6A2O95222 327 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 NPR2P20594 1047 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 CAPZA2P47755 286 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 PPOXP50336 477 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 LSM11P83369 360 aaKnown RBP eCLIP21.96■■□□□ 1.112e-28■□□□□ 11.1
VEGFA-220ENST00000519767 HGFACQ04756 655 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 PHYHD1Q5SRE7 291 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 ZNF540Q8NDQ6 660 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 OR6N1Q8NGY5 312 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 OR5J2Q8NH18 312 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 SLC26A7Q8TE54 656 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 RASSF5Q8WWW0 418 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 SORCS2Q96PQ0 1159 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 PIMREGQ9BSJ6 248 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 DENND2DQ9H6A0 471 aaPredicted RBP21.96■■□□□ 1.11
VEGFA-220ENST00000519767 MRGBPQ9NV56 204 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 TMEM160Q9NX00 188 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 B3GNT2Q9NY97 397 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 CDC42EP3Q9UKI2 254 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 ARFGEF3Q5TH69 2177 aa21.96■■□□□ 1.11
VEGFA-220ENST00000519767 IGHV2OR16-5A0A0B4J2B6 119 aa21.95■■□□□ 1.1
VEGFA-220ENST00000519767 A0A0G2JND7 137 aa21.95■■□□□ 1.1
VEGFA-220ENST00000519767 VWC2LB2RUY7 222 aa21.95■■□□□ 1.1
VEGFA-220ENST00000519767 M0R3H8 397 aa21.95■■□□□ 1.1
VEGFA-220ENST00000519767 LY6HO94772 140 aa21.95■■□□□ 1.1
VEGFA-220ENST00000519767 ERCC1P07992 297 aaPredicted RBP21.95■■□□□ 1.1
VEGFA-220ENST00000519767 THBS4P35443 961 aa21.95■■□□□ 1.1
VEGFA-220ENST00000519767 CYLC2Q14093 348 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms