RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ACSM1Q08AH1 577 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 FOXF1Q12946 379 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 TOMM20Q15388 145 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 FAM69AQ5T7M9 428 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 MAMDC2Q7Z304 686 aaPredicted RBP13.04□□□□□ -0.32
CLN8-204ENST00000519254 GHDCQ8N2G8 530 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 FADS6Q8N9I5 356 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 KBTBD8Q8NFY9 601 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 SMAP2Q8WU79 429 aaPredicted RBP13.04□□□□□ -0.32
CLN8-204ENST00000519254 SPRYD4Q8WW59 207 aaPredicted RBP13.04□□□□□ -0.32
CLN8-204ENST00000519254 SLC39A7Q92504 469 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 SLC25A36Q96CQ1 311 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 TMEM41AQ96HV5 264 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 C5orf34Q96MH7 638 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 DACH2Q96NX9 599 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 TBX5Q99593 518 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 ISG20L2Q9H9L3 353 aaKnown RBP13.04□□□□□ -0.32
CLN8-204ENST00000519254 ASB6Q9NWX5 421 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 STUB1Q9UNE7 303 aa13.04□□□□□ -0.32
CLN8-204ENST00000519254 CAB39Q9Y376 341 aaPredicted RBP13.04□□□□□ -0.32
CLN8-204ENST00000519254 SF3B6Q9Y3B4 125 aaKnown RBP13.04□□□□□ -0.32
CLN8-204ENST00000519254 APC2O95996 2303 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 ZFHX4Q86UP3 3567 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 DAPL1A0PJW8 107 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 PINLYPA6NC86 204 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 TRIM3O75382 744 aaPredicted RBP13.03□□□□□ -0.32
CLN8-204ENST00000519254 CNR1P21554 472 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 SDHAP31040 664 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 RFC3P40938 356 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 APOBEC1P41238 236 aaKnown RBP13.03□□□□□ -0.32
CLN8-204ENST00000519254 BMXP51813 675 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 GALEQ14376 348 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 TIGD3Q6B0B8 471 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 GDPGP1Q6ZNW5 385 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 ADCK1Q86TW2 530 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 EXD3Q8N9H8 876 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 LSM14AQ8ND56 463 aaKnown RBP13.03□□□□□ -0.32
CLN8-204ENST00000519254 MDS2Q8NDY4 140 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 OR10H4Q8NGA5 316 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 OR51L1Q8NGJ5 315 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 OR5M1Q8NGP8 315 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 SMPDL3BQ92485 455 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 ZMYND19Q96E35 227 aaPredicted RBP13.03□□□□□ -0.32
CLN8-204ENST00000519254 C1GALT1C1Q96EU7 318 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 TSPAN32Q96QS1 320 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 ALG8Q9BVK2 526 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 INPP5EQ9NRR6 644 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 DKKL1Q9UK85 242 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 RPH3AQ9Y2J0 694 aaPredicted RBP13.03□□□□□ -0.32
CLN8-204ENST00000519254 CSAG2Q9Y5P2 127 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 CEP295Q9C0D2 2601 aa13.03□□□□□ -0.32
CLN8-204ENST00000519254 PNMA8CA0A1B0GUJ8 204 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 MED19A0JLT2 244 aaPredicted RBP13.02□□□□□ -0.32
CLN8-204ENST00000519254 LRRTM2O43300 516 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 EFNA2O43921 213 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 CEACAM4O75871 244 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 CD46P15529 392 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 SPI1P17947 270 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 SERPINB10P48595 397 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 DIO1P49895 249 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 ZNF85Q03923 595 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 POU4F2Q12837 409 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 DCTN2Q13561 401 aaKnown RBP13.02□□□□□ -0.32
CLN8-204ENST00000519254 GGTLC2Q14390 218 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 SGCBQ16585 318 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 PLPPR5Q32ZL2 321 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 SLC25A53Q5H9E4 307 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 LEG1Q6P5S2 330 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 C5orf46Q6UWT4 87 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 SULF2Q8IWU5 870 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 ZFP41Q8N8Y5 198 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 OR2M7Q8NG81 312 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 OR5J2Q8NH18 312 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 HAS2Q92819 552 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 UFD1Q92890 307 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 FAM173AQ9BQD7 235 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 ASPNQ9BXN1 380 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 RNF32Q9H0A6 362 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 EXOSC4Q9NPD3 245 aaKnown RBP13.02□□□□□ -0.32
CLN8-204ENST00000519254 FRYQ5TBA9 3013 aa13.02□□□□□ -0.32
CLN8-204ENST00000519254 LRRC3CA6NJW4 275 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 FTCDNL1E5RQL4 147 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 K7ENP7 123 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 SERPINI2O75830 405 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 AHSA1O95433 338 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 TFP02787 698 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 SP1P08047 785 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 FREM3P0C091 2139 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 DPP4P27487 766 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 GRPRP30550 384 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 OPRL1P41146 370 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 TMPRSS3P57727 454 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 RPS25P62851 125 aaKnown RBP13.02□□□□□ -0.33
CLN8-204ENST00000519254 FOXK1P85037 733 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 PON3Q15166 354 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 ZNF766Q5HY98 468 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 EMC4Q5J8M3 183 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 SLC35D3Q5M8T2 416 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 SLC25A25Q6KCM7 469 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 INO80CQ6PI98 192 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms