RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 DOCK6Q96HP0 2047 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 A0A0B4J2A0 478 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 TEX13DA0A0J9YY54 714 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-208ENST00000519004 MKRN2OSH3BPM6 223 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 PRICKLE3O43900 615 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-208ENST00000519004 THY1P04216 161 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 CD3DP04234 171 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 CLUP10909 449 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 PTNP21246 168 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 CD1CP29017 333 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 EPHB3P54753 998 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 FXYD6P3P58550 94 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 SLC26A5P58743 744 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 HTRA4P83105 476 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-208ENST00000519004 FUT5Q11128 374 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 ST3GAL3Q11203 375 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 DHRS2Q13268 280 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 PPA1Q15181 289 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 DECR1Q16698 335 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 PNLIPRP3Q17RR3 467 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 YOD1Q5VVQ6 348 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-208ENST00000519004 FRRS1Q6ZNA5 592 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 TPGS1Q6ZTW0 290 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 KLHDC8AQ8IYD2 350 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 FBXO22Q8NEZ5 403 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 RGP1Q92546 391 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-208ENST00000519004 DVL3Q92997 716 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-208ENST00000519004 ARMC5Q96C12 935 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 F2RL3Q96RI0 385 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 LMAN2LQ9H0V9 348 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 FBXO44Q9H4M3 255 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 SHPKQ9UHJ6 478 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 GDF2Q9UK05 429 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-208ENST00000519004 NTNG1Q9Y2I2 539 aa12.41□□□□□ -0.42
PABPC1-208ENST00000519004 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 MEIS3P1A6NDR6 274 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 H7C1Q1 480 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 BHLHE40O14503 412 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 NPC1O15118 1278 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 SNRPCP09234 159 aaKnown RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 NDUFS1P28331 727 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 MAS1LP35410 378 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 ADCYAP1R1P41586 468 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 SGSHP51688 502 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 PRKXP51817 358 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 ZNF311Q5JNZ3 666 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 SLC35D3Q5M8T2 416 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 PLEKHS1Q5SXH7 462 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 MRM1Q6IN84 353 aaKnown RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 NPSR1Q6W5P4 371 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 C19orf47Q8N9M1 422 aaKnown RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 PNLDC1Q8NA58 520 aaKnown RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 SAT2Q96F10 170 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 SEPT5Q99719 369 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 NEUROD4Q9HD90 331 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 KRCC1Q9NPI7 259 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 STEAP1Q9UHE8 339 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 SH2B3Q9UQQ2 575 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 PLXND1Q9Y4D7 1925 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 FRMPD3Q5JV73 1810 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 M0QZQ0 153 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 BRINP1O60477 761 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 MED6O75586 246 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 ARG1P05089 322 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 CLTBP09497 229 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 RAB4AP20338 218 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 G0S2P27469 103 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 LPAR6P43657 344 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 NDUFA6P56556 154 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 TDGQ13569 410 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 SLBPQ14493 270 aaKnown RBP eCLIP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 NR0B2Q15466 257 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 USF2Q15853 346 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 ALG11Q2TAA5 492 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 PRR18Q8N4B5 295 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 TMEM255BQ8WV15 326 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 SECTM1Q8WVN6 248 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 ZNF775Q96BV0 537 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 ARHGDIGQ99819 225 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 ADAM19Q9H013 955 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 OR52D1Q9H346 318 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 TRPV4Q9HBA0 871 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 BCL2L10Q9HD36 194 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 MYOZ1Q9NP98 299 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 DOK5Q9P104 306 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 C5AR2Q9P296 337 aa12.4□□□□□ -0.42
PABPC1-208ENST00000519004 NOP16Q9Y3C1 178 aaKnown RBP12.4□□□□□ -0.42
PABPC1-208ENST00000519004 IGLV3-16A0A075B6K0 115 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 FAM221BA6H8Z2 402 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 FAM86C2PA6NEL3 165 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 ARL5CA6NH57 179 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 PRAMEF26H0Y7S4 382 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 AGPAT2O15120 278 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF208O43345 1280 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 XRCC3O43542 346 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 F10P00742 488 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 MMP3P08254 477 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 SLC2A5P22732 501 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 IMPA1P29218 277 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 PPP2R1BP30154 601 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms