RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 TCN1P20061 433 aaPredicted RBP2.87□□□□□ -1.95
SQLE-202ENST00000518604 SUCLG1P53597 346 aaKnown RBP2.87□□□□□ -1.95
SQLE-202ENST00000518604 PDIA2Q13087 525 aaKnown RBP2.87□□□□□ -1.95
SQLE-202ENST00000518604 ARHGAP19Q14CB8 494 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 ZMYND11Q15326 602 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 RFX4Q33E94 735 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 AGBL2Q5U5Z8 902 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 LRRC31Q6UY01 552 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 LRRC74BQ6ZQY2 392 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 ZNF621Q6ZSS3 439 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 PEX26Q7Z412 305 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 KCTD14Q9BQ13 255 aaPredicted RBP2.87□□□□□ -1.95
SQLE-202ENST00000518604 HYPKQ9NX55 129 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 ZNF226Q9NYT6 803 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 MMP17Q9ULZ9 603 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 WSB1Q9Y6I7 421 aa2.87□□□□□ -1.95
SQLE-202ENST00000518604 SYNJ2BP-COX16A0A087WUM0 186 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 A0A1W2PPE3 182 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 H3BNH8 94 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 SLC25A27O95847 323 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 C2P06681 752 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 NMUP48645 174 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 UGT2B15P54855 530 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 PIGGQ5H8A4 983 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 COA6Q5JTJ3 125 aaKnown RBP2.86□□□□□ -1.95
SQLE-202ENST00000518604 CTSL3PQ5NE16 218 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 TMEM135Q86UB9 458 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 CCDC54Q8NEL0 328 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 OR13C2Q8NGS9 318 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 ACER1Q8TDN7 264 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 NT5C3BQ969T7 300 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 FAM104AQ969W3 186 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 TCEANC2Q96MN5 208 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 SORT1Q99523 831 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 SH3GL1Q99961 368 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 GPR61Q9BZJ8 451 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 NT5MQ9NPB1 228 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 DMAP1Q9NPF5 467 aaPredicted RBP2.86□□□□□ -1.95
SQLE-202ENST00000518604 SPATA7Q9P0W8 599 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 TRAPPC4Q9Y296 219 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 PRG3Q9Y2Y8 225 aaPredicted RBP2.86□□□□□ -1.95
SQLE-202ENST00000518604 GTF3C1Q12789 2109 aa2.86□□□□□ -1.95
SQLE-202ENST00000518604 IGLV3-16A0A075B6K0 115 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 IGHV2-5P01817 119 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 ALDOBP05062 364 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 SMIM10L1P0DMW3 83 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 ATP1B2P14415 290 aaPredicted RBP2.85□□□□□ -1.95
SQLE-202ENST00000518604 SLC2A5P22732 501 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 BTCP35070 178 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 CRYBB2P43320 205 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 NPBWR2P48146 333 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 ACVR1Q04771 509 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 KCTD19Q17RG1 926 aaPredicted RBP2.85□□□□□ -1.95
SQLE-202ENST00000518604 PHYHD1Q5SRE7 291 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 TRIM40Q6P9F5 258 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 TIFABQ6ZNK6 161 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 LINC01551Q86U37 167 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 EGFL6Q8IUX8 553 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 ZNF786Q8N393 782 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 DUSP18Q8NEJ0 188 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 OR8J1Q8NGP2 316 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 DTX3LQ8TDB6 740 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 IL22RA2Q969J5 263 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 SMIM10Q96HG1 83 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 PLEKHA8Q96JA3 519 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 MS4A4EQ96PG1 132 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 OR8B4Q96RC9 309 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 PANX2Q96RD6 677 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 FMO2Q99518 471 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 GON7Q9BXV9 100 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 CLMPQ9H6B4 373 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 TM9SF3Q9HD45 589 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 ADAP2Q9NPF8 381 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 SUN2Q9UH99 717 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 KLK12Q9UKR0 248 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 CDHR2Q9BYE9 1310 aa2.85□□□□□ -1.95
SQLE-202ENST00000518604 RLFQ13129 1914 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.84□□□□□ -1.95
SQLE-202ENST00000518604 PPIAL4EA0A075B759 164 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 H0Y8G0 127 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 XKRYO14609 159 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 ERLIN2O94905 339 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 NDUFB10O96000 172 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 GKN3PP0CG01 181 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 PPIAL4FP0DN26 164 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 ETS2P15036 469 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 GPR6P46095 362 aaPredicted RBP2.84□□□□□ -1.95
SQLE-202ENST00000518604 SULT1E1P49888 294 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 FBXW4P57775 412 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 FZD2Q14332 565 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 SGCAQ16586 387 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 TSPO2Q5TGU0 170 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 KDM7AQ6ZMT4 941 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 SLC25A48Q6ZT89 311 aaKnown RBP2.84□□□□□ -1.95
SQLE-202ENST00000518604 NBPF5PQ86XG9 351 aaPredicted RBP2.84□□□□□ -1.95
SQLE-202ENST00000518604 ZADH2Q8N4Q0 377 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 FAM110BQ8TC76 370 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 MARCH1Q8TCQ1 289 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 GIMAP1Q8WWP7 306 aa2.84□□□□□ -1.95
SQLE-202ENST00000518604 EXOSC8Q96B26 276 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms