RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 SNX32Q86XE0 403 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 PEX5LQ8IYB4 626 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 CADM2Q8N3J6 435 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 SYT14Q8NB59 555 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 RNF217Q8TC41 542 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 STK35Q8TDR2 534 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 OXGR1Q96P68 337 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 GPA33Q99795 319 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 SLC35A5Q9BS91 424 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 TMEM109Q9BVC6 243 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 TXLNGYQ9BZA5 131 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 SLITRK2Q9H156 845 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 C7orf69Q9H7B7 122 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 SLC7A8Q9UHI5 535 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 DUSP13Q9UII6 198 aa9.8□□□□□ -0.84
TRAPPC9-203ENST00000517667 SLC22A23A1A5C7 686 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 FTCDNL1E5RQL4 147 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 RGS16O15492 202 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 CPSF4O95639 269 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 RAB36O95755 333 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 IGHV2-5P01817 119 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 HLA-HP01893 362 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 CD79AP11912 226 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 NCF2P19878 526 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 RAD52P43351 418 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 SELENOVP59797 346 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 MVKQ03426 396 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 C1DQ13901 141 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 LIN52Q52LA3 116 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 AGBL2Q5U5Z8 902 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 TMEM154Q6P9G4 183 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 ZNF627Q7L945 461 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 RETREG3Q86VR2 466 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 LRP11Q86VZ4 500 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 ANKRD46Q86W74 232 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 KDM8Q8N371 416 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 TRIML2Q8N7C3 387 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 ANKFN1Q8N957 763 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 SNX33Q8WV41 574 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 C22orf15Q8WYQ4 148 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 DVL3Q92997 716 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 TESCQ96BS2 214 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 SLC25A36Q96CQ1 311 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 ZNF837Q96EG3 531 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 TIMD4Q96H15 378 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 MS4A3Q96HJ5 214 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 OR2M2Q96R28 347 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 CENPHQ9H3R5 247 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 B3GAT2Q9NPZ5 323 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 MYEF2Q9P2K5 600 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 ZNF281Q9Y2X9 895 aa9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 PRKDCP78527 4128 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-203ENST00000517667 IGHV1-69-2A0A0G2JMI3 117 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 DNAJC9-AS1A6NH13 148 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 C17orf100A8MU93 164 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 CLDN25C9JDP6 229 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 AIM2O14862 343 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 OR2T1O43869 369 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 CDC14BO60729 498 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 SEC14L2O76054 403 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 GKN3PP0CG01 181 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 NR2F1P10589 423 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 ACAA2P42765 397 aaKnown RBP9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 CRYBB2P43320 205 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 MAGEB1P43366 347 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 PTDSS1P48651 473 aaKnown RBP9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 TUSC1Q2TAM9 212 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 AVPI1Q5T686 147 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 RNF220Q5VTB9 566 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 C5orf46Q6UWT4 87 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 ZNF813Q6ZN06 617 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 DOK3Q7L591 496 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 LSRQ86X29 649 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 RNF130Q86XS8 419 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 TMEM123Q8N131 208 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 C4orf33Q8N1A6 199 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 SIGLECL1Q8N7X8 197 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 RAB1CQ92928 201 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 SLC25A28Q96A46 364 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 LRRC58Q96CX6 371 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 ZNF75AQ96N20 296 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 ARMC7Q9H6L4 198 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 HINT3Q9NQE9 182 aaKnown RBP9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 RLIMQ9NVW2 624 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 SLCO1C1Q9NYB5 712 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 NKIRAS2Q9NYR9 191 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 ARMCX1Q9P291 453 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 B3GAT1Q9P2W7 334 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 OPN4Q9UHM6 478 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 FZR1Q9UM11 496 aa9.78□□□□□ -0.84
TRAPPC9-203ENST00000517667 PPIAL4EA0A075B759 164 aa9.77□□□□□ -0.85
TRAPPC9-203ENST00000517667 PPIAL4CA0A0B4J2A2 164 aa9.77□□□□□ -0.85
TRAPPC9-203ENST00000517667 LOC102725191A0A1B0GVB3 256 aa9.77□□□□□ -0.85
TRAPPC9-203ENST00000517667 PPIAL4DF5H284 164 aa9.77□□□□□ -0.85
TRAPPC9-203ENST00000517667 M0R3G1 203 aa9.77□□□□□ -0.85
TRAPPC9-203ENST00000517667 FZD7O75084 574 aa9.77□□□□□ -0.85
TRAPPC9-203ENST00000517667 UBL3O95164 117 aa9.77□□□□□ -0.85
TRAPPC9-203ENST00000517667 RNASE1P07998 156 aaKnown RBP9.77□□□□□ -0.85
TRAPPC9-203ENST00000517667 PPIAL4FP0DN26 164 aa9.77□□□□□ -0.85
TRAPPC9-203ENST00000517667 ZFP36P26651 326 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms