RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 ATG4BQ9Y4P1 393 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 WNT6Q9Y6F9 365 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 ATG2BQ96BY7 2078 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 DOCK9Q9BZ29 2069 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TET1Q8NFU7 2136 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 RALGAPA1Q6GYQ0 2036 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 FANCMQ8IYD8 2048 aa1.9□□□□□ -2.11
RNU1-40P-201ENST00000516816 TRBV23OR9-2A0A075B6M9 112 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 A0A0B4J203 849 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 A0A0B4J2E0 115 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 A0A0J9YY10 115 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 LOC100289279A0A1B0GTE1 492 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 C13orf42A0A1B0GVH6 325 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 A0A1B0GWA3 101 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 A0A1B0GX12 115 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 A0A1W2PP55 124 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 A0A1W2PPV9 198 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 A0A1W2PQU0 124 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM82A0PJX8 343 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 PRSS38A1L453 326 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 SMIM30A4D0T7 59 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 PRAMEF25A6NGN4 478 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 GGT3PA6NGU5 568 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 SERINC4A6NH21 518 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 TVP23AA6NH52 213 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR5H14A6NHG9 310 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 VSTM2BA6NLU5 285 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR6C76A6NM76 312 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF726A6NNF4 738 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 A8MVM7 634 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 GRXCR1A8MXD5 290 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 C1orf196B1AJZ1 125 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM229AB2RXF0 380 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 MCRIP1C9JLW8 97 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 F5H0A9 414 aaPredicted RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 F8W036 122 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 PRAMEF26H0Y7S4 382 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 H0YGG7 62 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 H0YIG0 161 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 H7C417 338 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 J3KRW8 73 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 M0R129 80 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 AGRPO00253 132 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 BHLHE40O14503 412 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 SOCS6O14544 535 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 SLC31A1O15431 190 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 MAGEB4O15481 346 aaPredicted RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 ARPC5O15511 151 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 HSPA12AO43301 675 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 PLRG1O43660 514 aaKnown RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 GMFGO60234 142 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 B4GALT3O60512 393 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 GALR3O60755 368 aaPredicted RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 B4GALT2O60909 372 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 LILRB5O75023 590 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 CDC123O75794 336 aaPredicted RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 JTBO76095 146 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 TOXO94900 526 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 GLSO94925 669 aaPredicted RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR2A4O95047 310 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 NKX2-2O95096 273 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 B3GALT4O96024 378 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 AMY2AP04746 511 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 CEACAM5P06731 702 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 LPLP06858 475 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 CTSLP07711 333 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 ADRB1P08588 477 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 IGFBP1P08833 259 aaPredicted RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 CD63P08962 238 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 H2BFMP0C1H6 154 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR4E1P0C645 316 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 THEGLP0DJG4 465 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 SMIM10L1P0DMW3 83 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 CCL5P13501 91 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 SNRPBP14678 240 aaKnown RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 RPA2P15927 270 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 HIST1H1CP16403 213 aaKnown RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF20P17024 532 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 CTRB1P17538 263 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 PRKACAP17612 351 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 RAB6AP20340 208 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 PVALBP20472 110 aaPredicted RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 CNR1P21554 472 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 TBXA2RP21731 343 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZP3P21754 424 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 HNRNPA2B1P22626 353 aaKnown RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 CERS1P27544 350 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 PSMB6P28072 239 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 MSX1P28360 303 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 HSD11B1P28845 292 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 TACR3P29371 465 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 SDHAP31040 664 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 TRHRP34981 398 aaPredicted RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 BCL6P41182 706 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 APOBEC1P41238 236 aaKnown RBP1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 RAD52P43351 418 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 PPICP45877 212 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 RABIFP47224 123 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 CX3CR1P49238 355 aa1.89□□□□□ -2.11
RNU1-40P-201ENST00000516816 FNTBP49356 437 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms