RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MEPEQ9NQ76 525 aaPredicted RBP11.2□□□□□ -0.62
CLCN3-210ENST00000515420 TAGLN3Q9UI15 199 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 RPS6KA6Q9UK32 745 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 SHISA9B4DS77 424 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 LRRN3E7EW58 273 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 ABCD4O14678 606 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 ARHGEF9O43307 516 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 SMPD2O60906 423 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 OR6A2O95222 327 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 HIST1H2ABP04908 130 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 HLA-DOBP13765 273 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 HSD17B1P14061 328 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 PTNP21246 168 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 AHCYP23526 432 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 CD40P25942 277 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 MNAT1P51948 309 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 FXNQ16595 210 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 TBRG1Q3YBR2 411 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 PRSS57Q6UWY2 283 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 HIST3H2AQ7L7L0 130 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 ZNF627Q7L945 461 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 LINGO2Q7L985 606 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 SLC46A3Q7Z3Q1 461 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 NANOGNBQ7Z5D8 188 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 VTCN1Q7Z7D3 282 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 NKAIN4Q8IVV8 208 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 C20orf196Q8IYI0 205 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 FAM169BQ8N8A8 192 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 KBTBD8Q8NFY9 601 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 OR6X1Q8NH79 312 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 TMEM255BQ8WV15 326 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 TMEM171Q8WVE6 324 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 BCL2L2Q92843 193 aaPredicted RBP11.19□□□□□ -0.62
CLCN3-210ENST00000515420 HIST1H2ACQ93077 130 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 FAM162AQ96A26 154 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 HSH2DQ96JZ2 352 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 CCT8L2Q96SF2 557 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 GSX2Q9BZM3 304 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 GRIP2Q9C0E4 1043 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 ANKRD19PQ9H560 264 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 CXorf56Q9H5V9 222 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 GPR35Q9HC97 309 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 FAIMQ9NVQ4 179 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 TAS2R5Q9NYW4 299 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 GMPR2Q9P2T1 348 aaKnown RBP11.19□□□□□ -0.62
CLCN3-210ENST00000515420 A4GNTQ9UNA3 340 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 MED31Q9Y3C7 131 aa11.19□□□□□ -0.62
CLCN3-210ENST00000515420 SLC35F4A4IF30 521 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 ZNF726A6NNF4 738 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 ZNF99A8MXY4 864 aaPredicted RBP11.18□□□□□ -0.62
CLCN3-210ENST00000515420 KPNA4O00629 521 aaPredicted RBP11.18□□□□□ -0.62
CLCN3-210ENST00000515420 SHOX2O60902 331 aaPredicted RBP11.18□□□□□ -0.62
CLCN3-210ENST00000515420 GMNNO75496 209 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 OR7A10O76100 309 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 ZNF682O95780 498 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 FAM107AO95990 144 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 SERPINA1P01009 418 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 TSPAN19P0C672 248 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 DANCRP0C864 163 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 UMPSP11172 480 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 ZNF83P51522 516 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 UGT2B15P54855 530 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 CDH11P55287 796 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 SLC25A3Q00325 362 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 LGALS3BPQ08380 585 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 KRT72Q14CN4 511 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 SAMD4BQ5PRF9 694 aaKnown RBP11.18□□□□□ -0.62
CLCN3-210ENST00000515420 GKAP1Q5VSY0 366 aaPredicted RBP11.18□□□□□ -0.62
CLCN3-210ENST00000515420 C16orf89Q6UX73 402 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 FKBP9P1Q75LS8 142 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 SLC35D2Q76EJ3 337 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 HDDC2Q7Z4H3 204 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 DEPDC4Q8N2C3 294 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 SGTBQ96EQ0 304 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 FNDC11Q9BVV2 318 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 NELFAQ9H3P2 528 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 GORASP2Q9H8Y8 452 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 CRLF2Q9HC73 371 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 DCAF13Q9NV06 445 aaKnown RBP11.18□□□□□ -0.62
CLCN3-210ENST00000515420 MED29Q9NX70 200 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 ADA2Q9NZK5 511 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 CRNNQ9UBG3 495 aaPredicted RBP11.18□□□□□ -0.62
CLCN3-210ENST00000515420 MAGEL2Q9UJ55 1249 aa11.18□□□□□ -0.62
CLCN3-210ENST00000515420 SAMD4AQ9UPU9 718 aaKnown RBP11.18□□□□□ -0.62
CLCN3-210ENST00000515420 MAP1AP78559 2803 aaPredicted RBP11.18□□□□□ -0.62
CLCN3-210ENST00000515420 A0A1W2PR80 420 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 NPIPB13A6NJU9 1138 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 CENPBD1B2RD01 187 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 NPIPB4C9JG80 1138 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 C11orf98E9PRG8 122 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 M0R1B8 84 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 RNF13O43567 381 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 ENTPD5O75356 428 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 IFNGR1P15260 489 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 CDH2P19022 906 aaPredicted RBP11.17□□□□□ -0.62
CLCN3-210ENST00000515420 FUT1P19526 365 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 UBE2NP61088 152 aaKnown RBP11.17□□□□□ -0.62
CLCN3-210ENST00000515420 RPS4XP62701 263 aaKnown RBP11.17□□□□□ -0.62
CLCN3-210ENST00000515420 ADAM8P78325 824 aa11.17□□□□□ -0.62
CLCN3-210ENST00000515420 NKX6-1P78426 367 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms