RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 GSTA4O15217 222 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 SLC22A2O15244 555 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 ARHGEF9O43307 516 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 SNX3O60493 162 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 ZNF682O95780 498 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 CELA3BP08861 270 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 UMPSP11172 480 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 IFNGR1P15260 489 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 FUT1P19526 365 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 PTAFRP25105 342 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 GSK3BP49841 420 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 UGT2B15P54855 530 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 BIDP55957 195 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 PSME3P61289 254 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 RPS4XP62701 263 aaKnown RBP10.04□□□□□ -0.8
VCAN-212ENST00000515397 MELKQ14680 651 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 ZNF74Q16587 644 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 SHEQ5VZ18 495 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 KLHL17Q6TDP4 642 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 C5orf46Q6UWT4 87 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 C20orf196Q8IYI0 205 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 TMEM123Q8N131 208 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 GPR137CQ8N3F9 429 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 RNF148Q8N7C7 305 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 RBM15BQ8NDT2 890 aaKnown RBP10.04□□□□□ -0.8
VCAN-212ENST00000515397 OR5J2Q8NH18 312 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 EVA1AQ9H8M9 152 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 EFCAB1Q9HAE3 211 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 C20orf141Q9NUB4 165 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 MRGBPQ9NV56 204 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 GDF2Q9UK05 429 aaPredicted RBP10.04□□□□□ -0.8
VCAN-212ENST00000515397 BAG5Q9UL15 447 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 CORINQ9Y5Q5 1042 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 NIPBLQ6KC79 2804 aaeCLIP10.03□□□□□ -0.8
VCAN-212ENST00000515397 IGHV1-18A0A0C4DH31 117 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 ZNF726A6NNF4 738 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 ATP6V1G2-DDX39BF2Z307 99 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 H7C1Q1 480 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 RNF13O43567 381 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 PIP5K1CO60331 668 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 FZD7O75084 574 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 OR6A2O95222 327 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 IFNA14P01570 189 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 HIST1H2ABP04908 130 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 F13BP05160 661 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 MSX2P35548 267 aaPredicted RBP10.03□□□□□ -0.8
VCAN-212ENST00000515397 CAPZA2P47755 286 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 UBE2NP61088 152 aaKnown RBP10.03□□□□□ -0.8
VCAN-212ENST00000515397 MFSD13AQ14CX5 517 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 SWT1Q5T5J6 900 aaKnown RBP10.03□□□□□ -0.8
VCAN-212ENST00000515397 C8orf82Q6P1X6 216 aaPredicted RBP10.03□□□□□ -0.8
VCAN-212ENST00000515397 KLHL24Q6TFL4 600 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 HIST3H2AQ7L7L0 130 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 SLC46A3Q7Z3Q1 461 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 ABHD12BQ7Z5M8 362 aaPredicted RBP10.03□□□□□ -0.8
VCAN-212ENST00000515397 MYPOPQ86VE0 399 aaPredicted RBP10.03□□□□□ -0.8
VCAN-212ENST00000515397 MAPK1IP1LQ8NDC0 245 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 ADPRHL1Q8NDY3 354 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 C1orf162Q8NEQ5 155 aaPredicted RBP10.03□□□□□ -0.8
VCAN-212ENST00000515397 OR6N1Q8NGY5 312 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 OR6S1Q8NH40 331 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 RASSF5Q8WWW0 418 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 HIST1H2ACQ93077 130 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 GSX2Q9BZM3 304 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 LINC00470Q9BZP3 86 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 PCDHAC1Q9H158 963 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 CXorf56Q9H5V9 222 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 NANSQ9NR45 359 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 ZNF701Q9NV72 531 aaPredicted RBP10.03□□□□□ -0.8
VCAN-212ENST00000515397 EGFL7Q9UHF1 273 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 RCE1Q9Y256 329 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 AMDHD2Q9Y303 409 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 NF1P21359 2839 aa10.03□□□□□ -0.8
VCAN-212ENST00000515397 LOC102725191A0A1B0GVB3 256 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 OVOL3O00110 214 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 WNT11O96014 354 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 SERPINA1P01009 418 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 PATE4P0C8F1 98 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 TCN1P20061 433 aaPredicted RBP10.02□□□□□ -0.81
VCAN-212ENST00000515397 AQP2P41181 271 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 FABP6P51161 128 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 SELENOWP63302 87 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 RUNX1T1Q06455 604 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 PIGFQ07326 219 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 ANKRD16Q6P6B7 361 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 FKBP9P1Q75LS8 142 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 SLC35D2Q76EJ3 337 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 PXKQ7Z7A4 578 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 LRRC75A-AS1Q8N1F1 130 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 C17orf78Q8N4C9 275 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 SCAIQ8N9R8 606 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 FAM156AQ8NDB6 213 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 PIK3C3Q8NEB9 887 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 MOSPD2Q8NHP6 518 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 TMEM239Q8WW34 195 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 MPP4Q96JB8 637 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 HOPXQ9BPY8 73 aaPredicted RBP10.02□□□□□ -0.81
VCAN-212ENST00000515397 ZNF426Q9BUY5 554 aa10.02□□□□□ -0.81
VCAN-212ENST00000515397 TRAF4Q9BUZ4 470 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms