RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TBC1D23Q9NUY8 699 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 H3BN98 237 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 CCL21O00585 134 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 MITFO75030 526 aaPredicted RBP18.65■□□□□ 0.58
LSM6-207ENST00000515311 TMIGD3P0DMS9 266 aaPredicted RBP18.65■□□□□ 0.58
LSM6-207ENST00000515311 HLA-DOBP13765 273 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 APEHP13798 732 aaKnown RBP18.65■□□□□ 0.58
LSM6-207ENST00000515311 CDH2P19022 906 aaPredicted RBP18.65■□□□□ 0.58
LSM6-207ENST00000515311 CTXN1P60606 82 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 TMEM201Q5SNT2 666 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 EEF1A1P5Q5VTE0 462 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 FAM214BQ7L5A3 538 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 GALNT5Q7Z7M9 940 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 GCNT2Q8N0V5 402 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 OR8D4Q8NGM9 314 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 NRG4Q8WWG1 115 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 INTS12Q96CB8 462 aaKnown RBP18.65■□□□□ 0.58
LSM6-207ENST00000515311 RDH12Q96NR8 316 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 KATNB1Q9BVA0 655 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 GABARAPL3Q9BY60 117 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 PLA2G12AQ9BZM1 189 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 TXNIPQ9H3M7 391 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 RCE1Q9Y256 329 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 EMC9Q9Y3B6 208 aa18.65■□□□□ 0.58
LSM6-207ENST00000515311 HSPB2A8KAH6 182 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 AKAP8O43823 692 aaKnown RBP18.64■□□□□ 0.57
LSM6-207ENST00000515311 IFNGR1P15260 489 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 HSPB2Q16082 182 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 ACKR1Q16570 336 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 C4orf17Q53FE4 359 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 MTFR2Q6P444 385 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 SLC35D2Q76EJ3 337 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 HDDC2Q7Z4H3 204 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 IGFN1Q86VF2 1251 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 TUSC5Q8IXB3 177 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 PRR7Q8TB68 274 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 ADAD1Q96M93 576 aaKnown RBP18.64■□□□□ 0.57
LSM6-207ENST00000515311 ZNF385AQ96PM9 386 aaKnown RBP18.64■□□□□ 0.57
LSM6-207ENST00000515311 POLDIP3Q9BY77 421 aaKnown RBP18.64■□□□□ 0.57
LSM6-207ENST00000515311 VCXQ9H320 206 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 VCX3BQ9H321 246 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 IL20RAQ9UHF4 553 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 CLEC4AQ9UMR7 237 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 BAIAP2Q9UQB8 552 aa18.64■□□□□ 0.57
LSM6-207ENST00000515311 BHLHE40O14503 412 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 ARPC3O15145 178 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 IDH3BO43837 385 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 SERPINI2O75830 405 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 IGFBP1P08833 259 aaPredicted RBP18.63■□□□□ 0.57
LSM6-207ENST00000515311 RPS6KA3P51812 740 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 CRISP1P54107 249 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 FBXW10Q5XX13 1052 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 FAM205BPQ63HN1 556 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 GPR139Q6DWJ6 353 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 FAM122BQ7Z309 247 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 NAXEQ8NCW5 288 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 OR2T33Q8NG76 320 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 RND1Q92730 232 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 IFT27Q9BW83 186 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 SFXN3Q9BWM7 321 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 TSSK6Q9BXA6 273 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 RASSF4Q9H2L5 321 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 PARPBPQ9NWS1 579 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 NOSIPQ9Y314 301 aaKnown RBP18.63■□□□□ 0.57
LSM6-207ENST00000515311 ADAM18Q9Y3Q7 739 aa18.63■□□□□ 0.57
LSM6-207ENST00000515311 HIVEP3Q5T1R4 2406 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 A0A0G2JNJ9 132 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 IMPA2O14732 288 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 TNFSF13O75888 250 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 PPP1R3DO95685 299 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 TXNDC12O95881 172 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 IL18BPO95998 194 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 BCL10O95999 233 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 CTSSP25774 331 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 POU1F1P28069 291 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 SDHAP31040 664 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 KIR2DL2P43627 348 aaPredicted RBP18.62■□□□□ 0.57
LSM6-207ENST00000515311 PTDSS1P48651 473 aaKnown RBP18.62■□□□□ 0.57
LSM6-207ENST00000515311 CLDN17P56750 224 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 RPL27P61353 136 aaKnown RBP18.62■□□□□ 0.57
LSM6-207ENST00000515311 ERVK-25P63136 954 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 FOXF2Q12947 444 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 CLEC12AQ5QGZ9 265 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 ARMC4Q5T2S8 1044 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 SLC27A4Q6P1M0 643 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 FJX1Q86VR8 437 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 LNX2Q8N448 690 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 GALNT4Q8N4A0 578 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 OR6K3Q8NGY3 331 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 OR6X1Q8NH79 312 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 ASB10Q8WXI3 467 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 TXNDC15Q96J42 360 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 TSPAN32Q96QS1 320 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 SLC25A19Q9HC21 320 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 MED29Q9NX70 200 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 SMPD3Q9NY59 655 aaPredicted RBP18.62■□□□□ 0.57
LSM6-207ENST00000515311 GRHPRQ9UBQ7 328 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 ZNF629Q9UEG4 869 aaPredicted RBP18.62■□□□□ 0.57
LSM6-207ENST00000515311 Q9UFV3 132 aa18.62■□□□□ 0.57
LSM6-207ENST00000515311 INTS1Q8N201 2190 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms