RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 ROR2Q01974 943 aaKnown RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 KEAP1Q14145 624 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 UBE2UQ5VVX9 321 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 LRRC56Q8IYG6 542 aaPredicted RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 SMRP1Q8NCR6 262 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 OR2T27Q8NH04 317 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TMEM163Q8TC26 289 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CMTM3Q96MX0 182 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 RANBP3Q9H6Z4 567 aaPredicted RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 GORASP2Q9H8Y8 452 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF446Q9NWS9 450 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 NDUFB3O43676 98 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 LILRB5O75023 590 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 RAB3DO95716 219 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 STSP08842 583 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CTXN2P0C2S0 81 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CNR1P21554 472 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 KITLGP21583 273 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ITGB8P26012 769 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 RPL27P61353 136 aaKnown RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 EMC4Q5J8M3 183 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZBTB46Q86UZ6 589 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 FAM185AQ8N0U4 392 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 RBMXL3Q8N7X1 1067 aaKnown RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZBTB8BQ8NAP8 495 aaPredicted RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 OR4D6Q8NGJ1 314 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 KCNG3Q8TAE7 436 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 EMG1Q92979 244 aaKnown RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 FBXW5Q969U6 566 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 GLIPR2Q9H4G4 154 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 PTGDR2Q9Y5Y4 395 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TOGARAM1Q9Y4F4 1720 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 A0A1W2PPV4 95 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SLC35F4A4IF30 521 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 F13BP05160 661 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 OVCH1Q7RTY7 1134 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 LSRQ86X29 649 aaPredicted RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF573Q86YE8 665 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SULF2Q8IWU5 870 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 GALNT16Q8N428 558 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SEMA6DQ8NFY4 1073 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 OR51D1Q8NGF3 324 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 OR51L1Q8NGJ5 315 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 NEURL3Q96EH8 262 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 DAZAP1Q96EP5 407 aaKnown RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 BCL7BQ9BQE9 202 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 BCO1Q9HAY6 547 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 DCAF13Q9NV06 445 aaKnown RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 UCKL1Q9NWZ5 548 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 AMDHD2Q9Y303 409 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 GFYI3L273 518 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 FRS3O43559 492 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF254O75437 659 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TGM6O95932 706 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CLEC3BP05452 202 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TMIGD3P0DMS9 266 aaPredicted RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 OPRM1P35372 400 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 AQP2P41181 271 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ECI1P42126 302 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 LTC4SQ16873 150 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SLC22A6Q4U2R8 563 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 THEM4Q5T1C6 240 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 DOK3Q7L591 496 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SLC36A1Q7Z2H8 476 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 VTCN1Q7Z7D3 282 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 GLB1L2Q8IW92 636 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TMEM130Q8N3G9 435 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF740Q8NDX6 193 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF420Q8TAQ5 688 aaPredicted RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 PRR7Q8TB68 274 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 STK35Q8TDR2 534 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF707Q96C28 371 aaPredicted RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 GNRHR2Q96P88 292 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SNX18Q96RF0 628 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 FN3KRPQ9HA64 309 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 GFOD1Q9NXC2 390 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 PCDHGA1Q9Y5H4 931 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 KDM3BQ7LBC6 1761 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TRAV27A0A087WT01 109 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 IGHV1OR21-1A0A087WYE8 117 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 C17orf112F2Z3M2 114 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF195O14628 629 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CYC1P08574 325 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 RAB40ALP0C0E4 278 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TBPP20226 339 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 S100A2P29034 98 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 EVI2BP34910 448 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CCR2P41597 374 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 HOXA1P49639 335 aaPredicted RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF133P52736 654 aaPredicted RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF791Q3KP31 576 aaPredicted RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 ARHGAP11BQ3KRB8 267 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 PLK5Q496M5 336 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 LRRC10Q5BKY1 277 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 GPR157Q5UAW9 335 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 FAM109BQ6ICB4 259 aaPredicted RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 FAM71E1Q6IPT2 247 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 BTNL3Q6UXE8 466 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CD300LGQ6UXG3 332 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SP7Q8TDD2 431 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms