RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 BIRC8Q96P09 236 aa5.11□□□□□ -1.59
USP53-206ENST00000510737 QKIQ96PU8 341 aaKnown RBP eCLIP5.11□□□□□ -1.59
USP53-206ENST00000510737 ERGIC2Q96RQ1 377 aa5.11□□□□□ -1.59
USP53-206ENST00000510737 OR10A4Q9H209 315 aa5.11□□□□□ -1.59
USP53-206ENST00000510737 SPNS1Q9H2V7 528 aa5.11□□□□□ -1.59
USP53-206ENST00000510737 FAM114A2Q9NRY5 505 aa5.11□□□□□ -1.59
USP53-206ENST00000510737 DNAJC11Q9NVH1 559 aa5.11□□□□□ -1.59
USP53-206ENST00000510737 FAIMQ9NVQ4 179 aa5.11□□□□□ -1.59
USP53-206ENST00000510737 PDP1Q9P0J1 537 aaPredicted RBP5.11□□□□□ -1.59
USP53-206ENST00000510737 PTBP2Q9UKA9 531 aaKnown RBP5.11□□□□□ -1.59
USP53-206ENST00000510737 CADP27708 2225 aa5.11□□□□□ -1.59
USP53-206ENST00000510737 DNAH9Q9NYC9 4486 aa5.11□□□□□ -1.59
USP53-206ENST00000510737 A0A0G2JN53 185 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 TRBC2A0A5B9 178 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 HACD1B0YJ81 288 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 NDUFS8O00217 210 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 NIPSNAP2O75323 286 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 PEX14O75381 377 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 NDUFS3O75489 264 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 CATP04040 527 aaKnown RBP5.1□□□□□ -1.59
USP53-206ENST00000510737 PSMB1P20618 241 aaKnown RBP5.1□□□□□ -1.59
USP53-206ENST00000510737 IL11P20809 199 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 ATP5DP30049 168 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 PTGDSP41222 190 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 CCT5P48643 541 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 SUCLG1P53597 346 aaKnown RBP5.1□□□□□ -1.59
USP53-206ENST00000510737 RAB38P57729 211 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 TBPL1P62380 186 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 ACVR1Q04771 509 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 RGS1Q08116 209 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 KLHL30Q0D2K2 578 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 GAGE2BQ13066 116 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 DOC2AQ14183 400 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 TFDP2Q14188 446 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 BCL2A1Q16548 175 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 ZSWIM7Q19AV6 140 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 KBTBD12Q3ZCT8 623 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 IQCCQ4KMZ1 466 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 GAGE2EQ4V326 116 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 ITPRIPL1Q6GPH6 555 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 GAGE2AQ6NT46 116 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 TRIM40Q6P9F5 258 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 AFTPHQ6ULP2 937 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 ANGPTL8Q6UXH0 198 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 ZNF554Q86TJ5 538 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 C17orf64Q86WR6 236 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 ZNF595Q8IYB9 648 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 ZNF619Q8N2I2 560 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 FNDC9Q8TBE3 224 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 PANX2Q96RD6 677 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 HBEGFQ99075 208 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 OR2B2Q9GZK3 357 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 SLITRK2Q9H156 845 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 GAGE2DQ9UEU5 116 aa5.1□□□□□ -1.59
USP53-206ENST00000510737 DNAH1Q9P2D7 4330 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 A0A087X0T9 212 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 TP53I11O14683 189 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 PIN1P1O15428 100 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 ICOSLGO75144 302 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 CBR3O75828 277 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 AQP8O94778 261 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 PRB2P02812 416 aaPredicted RBP5.09□□□□□ -1.59
USP53-206ENST00000510737 SPARCP09486 303 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 FAM228BP0C875 321 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 RPS3P23396 243 aaKnown RBP eCLIP5.09□□□□□ -1.59
USP53-206ENST00000510737 GCKP35557 465 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 PPARGP37231 505 aaPredicted RBP5.09□□□□□ -1.59
USP53-206ENST00000510737 LIM2P55344 173 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 UBA52P62987 128 aaKnown RBP5.09□□□□□ -1.59
USP53-206ENST00000510737 STX4Q12846 297 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 TOR1AIP1Q5JTV8 583 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 GLDNQ6ZMI3 551 aaPredicted RBP5.09□□□□□ -1.59
USP53-206ENST00000510737 CHMP1BQ7LBR1 199 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 APTXQ7Z2E3 356 aaKnown RBP5.09□□□□□ -1.59
USP53-206ENST00000510737 R3HCC1LQ7Z5L2 792 aaKnown RBP5.09□□□□□ -1.59
USP53-206ENST00000510737 IFNEQ86WN2 208 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 C11orf53Q8IXP5 236 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 RCOR2Q8IZ40 523 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 MUC15Q8N387 334 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 STEAP2Q8NFT2 490 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 OR4K3Q96R72 315 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 DHRS9Q9BPW9 319 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 SOSTQ9BQB4 213 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 BPESC1Q9GZL8 116 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 PCBD2Q9H0N5 130 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 CDC42EP4Q9H3Q1 356 aaKnown RBP5.09□□□□□ -1.59
USP53-206ENST00000510737 A4GALTQ9NPC4 353 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 COPS7AQ9UBW8 275 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 CLEC4AQ9UMR7 237 aa5.09□□□□□ -1.59
USP53-206ENST00000510737 EXO1Q9UQ84 846 aaKnown RBP5.09□□□□□ -1.59
USP53-206ENST00000510737 COL7A1Q02388 2944 aa5.09□□□□□ -1.6
USP53-206ENST00000510737 LOC390937A0A1W2PQ73 354 aa5.08□□□□□ -1.6
USP53-206ENST00000510737 URADA6NGE7 173 aa5.08□□□□□ -1.6
USP53-206ENST00000510737 B4DXG7 233 aa5.08□□□□□ -1.6
USP53-206ENST00000510737 H7C0C1 242 aa5.08□□□□□ -1.6
USP53-206ENST00000510737 SOCS3O14543 225 aa5.08□□□□□ -1.6
USP53-206ENST00000510737 OGG1O15527 345 aa5.08□□□□□ -1.6
USP53-206ENST00000510737 ZBTB14O43829 449 aa5.08□□□□□ -1.6
USP53-206ENST00000510737 GCM2O75603 506 aaPredicted RBP5.08□□□□□ -1.6
USP53-206ENST00000510737 CLPSP04118 112 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms