RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 TECTBQ96PL2 329 aa3.12□□□□□ -1.91
NUP54-209ENST00000510569 NLNQ9BYT8 704 aa3.12□□□□□ -1.91
NUP54-209ENST00000510569 POTEKPQ9BYX7 375 aa3.12□□□□□ -1.91
NUP54-209ENST00000510569 DERL2Q9GZP9 239 aa3.12□□□□□ -1.91
NUP54-209ENST00000510569 CSNK1G1Q9HCP0 422 aa3.12□□□□□ -1.91
NUP54-209ENST00000510569 PISDQ9UG56 409 aa3.12□□□□□ -1.91
NUP54-209ENST00000510569 SLC7A8Q9UHI5 535 aa3.12□□□□□ -1.91
NUP54-209ENST00000510569 ENPP5Q9UJA9 477 aa3.12□□□□□ -1.91
NUP54-209ENST00000510569 GGA2Q9UJY4 613 aa3.12□□□□□ -1.91
NUP54-209ENST00000510569 MARF1Q9Y4F3 1742 aaKnown RBP3.12□□□□□ -1.91
NUP54-209ENST00000510569 KIF24Q5T7B8 1368 aa3.12□□□□□ -1.91
NUP54-209ENST00000510569 XRN1Q8IZH2 1706 aaKnown RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 FAM231BA6NCW3 169 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 A8MXQ7 604 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 E7ESA3 106 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 PPIAL4DF5H284 164 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 GOLGA8RI6L899 631 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 M0R296 226 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 PDLIM1O00151 329 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 PDXKO00764 312 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 KDELR3O43731 214 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 DUX1O43812 170 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 SEMA3DO95025 777 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 NSA2O95478 260 aaKnown RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 FTH1P02794 183 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 SNRPCP09234 159 aaKnown RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 ANXA4P09525 319 aaPredicted RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 SLC35E2P0CK97 266 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 PNMA6AP0CW24 399 aaPredicted RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 LAMP1P11279 417 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 CPA3P15088 417 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 CPN1P15169 458 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 GSTM3P21266 225 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 CFL1P23528 166 aaKnown RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 NLRP11P59045 1033 aaKnown RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 BDH1Q02338 343 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 SLC3A1Q07837 685 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 MEF2DQ14814 521 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 HEPACAMQ14CZ8 416 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 UAP1Q16222 522 aaPredicted RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 MOGQ16653 247 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 CDKL4Q5MAI5 379 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 GPR157Q5UAW9 335 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 ZNF470Q6ECI4 717 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 Q6P435 159 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 TTC33Q6PID6 262 aaPredicted RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 CD164L2Q6UWJ8 174 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 TIFABQ6ZNK6 161 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 SCD5Q86SK9 330 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 CYP4Z1Q86W10 505 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 C17orf64Q86WR6 236 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 RBM45Q8IUH3 476 aaKnown RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 NUDCD3Q8IVD9 361 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 CEND1Q8N111 149 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 KIAA0895Q8NCT3 520 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 CHDHQ8NE62 594 aaPredicted RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 FBXL13Q8NEE6 735 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 ZNF680Q8NEM1 530 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 OR4A16Q8NH70 328 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 CRYGNQ8WXF5 182 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 ARNTL2Q8WYA1 636 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 PINX1Q96BK5 328 aaKnown RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 CEP19Q96LK0 163 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 RASL10BQ96S79 203 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 CCNL2Q96S94 520 aaPredicted RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 CNPY3Q9BT09 278 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 UPF3BQ9BZI7 483 aaKnown RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 ROPN1BQ9BZX4 212 aaPredicted RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 DRC3Q9H069 523 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 RAB1BQ9H0U4 201 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 CALHM2Q9HA72 323 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 MRPS30Q9NP92 439 aaKnown RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 TIGARQ9NQ88 270 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 C8orf4Q9NR00 106 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 C20orf96Q9NUD7 363 aaPredicted RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 ELOVL2Q9NXB9 296 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 MIS18AQ9NYP9 233 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 TAS2R7Q9NYW3 318 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 MTCH1Q9NZJ7 389 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 PSMC3IPQ9P2W1 217 aaPredicted RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 DCDC2Q9UHG0 476 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 KLHL21Q9UJP4 597 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 RASD1Q9Y272 281 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 PIGLQ9Y2B2 252 aa3.11□□□□□ -1.91
NUP54-209ENST00000510569 IBTKQ9P2D0 1353 aaPredicted RBP3.11□□□□□ -1.91
NUP54-209ENST00000510569 SSH2Q76I76 1423 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 ATP10DQ9P241 1426 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 ITSN1Q15811 1721 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 ATP6AP2A0A1C7CYW4 349 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 ESYT2A0FGR8 921 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 TMEM89A2RUT3 159 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 WASHC1A8K0Z3 465 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 EFCAB7A8K855 629 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 EEF2KO00418 725 aaKnown RBP3.1□□□□□ -1.91
NUP54-209ENST00000510569 ADAM12O43184 909 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 PSMD3O43242 534 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 CPNE6O95741 557 aa3.1□□□□□ -1.91
NUP54-209ENST00000510569 IL6P05231 212 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms