RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	FZD7	O75084	574 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	NPIPB7	O75200	414 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	GMNN	O75496	209 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	CYP7B1	O75881	506 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	PRKD3	O94806	890 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	PRSS23	O95084	383 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	THY1	P04216	161 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	UQCRB	P14927	111 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	ZNF23	P17027	643 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	TNFRSF1B	P20333	461 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	AGTR1	P30556	359 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	RYK	P34925	604 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	MAGEA2	P43356	314 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	OR1E2	P47887	323 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	CLK1	P49759	484 aa	Known RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	ZNF41	P51814	821 aa	Predicted RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	RGS8	P57771	180 aa	Predicted RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	HOXC5	Q00444	222 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	FOXF1	Q12946	379 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	OR1Q1	Q15612	314 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	CARTPT	Q16568	116 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	ZSCAN26	Q16670	478 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	IFI44L	Q53G44	452 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	SWT1	Q5T5J6	900 aa	Known RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	ZNF613	Q6PF04	617 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	PIWIL3	Q7Z3Z3	882 aa	Known RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	PEG10	Q86TG7	708 aa	Known RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	PIAS4	Q8N2W9	510 aa	Predicted RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	TMCO5A	Q8N6Q1	288 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	FAM86B1	Q8N7N1	296 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	ZNF418	Q8TF45	676 aa	Predicted RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	DNAJA4	Q8WW22	397 aa	Predicted RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	GEMIN6	Q8WXD5	167 aa	Known RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	KISS1R	Q969F8	398 aa	Predicted RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	MCUR1	Q96AQ8	359 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	DUS3L	Q96G46	650 aa	Known RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	HSH2D	Q96JZ2	352 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	ADGRG7	Q96K78	797 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	FOXN4	Q96NZ1	517 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	MCHR1	Q99705	422 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	ZNF426	Q9BUY5	554 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	MAGIX	Q9H6Y5	334 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	METTL17	Q9H7H0	456 aa	Predicted RBP	7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	IL1RAP	Q9NPH3	570 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	GLRX2	Q9NS18	164 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	SLC13A4	Q9UKG4	626 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	POU2F3	Q9UKI9	436 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	A4GNT	Q9UNA3	340 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	VDAC3	Q9Y277	283 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	SLC9A8	Q9Y2E8	581 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535	SH3GLB1	Q9Y371	365 aa		7.53	□□□□□ -1.2
RACK1-222	ENST00000509535		A0A087WUJ7	227 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	TMED7-TICAM2	A0A0A6YYA0	188 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535		A0A1B0GWA3	101 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	TRIM77	I1YAP6	450 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	FFAR1	O14842	300 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	SMAD9	O15198	467 aa	Known RBP	7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	ZNF682	O95780	498 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	NUDT14	O95848	222 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	ADA	P00813	363 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	THRB	P10828	461 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	UMPS	P11172	480 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	BMP4	P12644	408 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	HOXB6	P17509	224 aa	Known RBP	7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	SHC1	P29353	583 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	TACR3	P29371	465 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	FABP6	P51161	128 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	CCR4	P51679	360 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	POLR2H	P52434	150 aa	Known RBP	7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	COPZ1	P61923	177 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	EGR4	Q05215	589 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	LGALS3BP	Q08380	585 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	SELENBP1	Q13228	472 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	PPA1	Q15181	289 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	STK11	Q15831	433 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	ENTPD8	Q5MY95	495 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	ULK3	Q6PHR2	472 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	SLC22A25	Q6T423	547 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	SHISA2	Q6UWI4	295 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	TFAP2E	Q6VUC0	442 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	CYP2R1	Q6VVX0	501 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	BHLHA15	Q7RTS1	189 aa	Predicted RBP	7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	RANBP3L	Q86VV4	465 aa	Predicted RBP	7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	LILRA2	Q8N149	483 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	PAPD5	Q8NDF8	572 aa	Known RBP	7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	OR10D3	Q8NH80	312 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	ZNF563	Q8TA94	476 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	ADAMTS16	Q8TE57	1224 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	CCDC124	Q96CT7	223 aa	Known RBP	7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	TPD52L3	Q96J77	140 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	RADIL	Q96JH8	1075 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	DHRS1	Q96LJ7	313 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	USB1	Q9BQ65	265 aa	Known RBP	7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	PRSS27	Q9BQR3	290 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	ZNF747	Q9BV97	191 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	RBM4	Q9BWF3	364 aa	Known RBP	7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	TMEM27	Q9HBJ8	222 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	CTPS2	Q9NRF8	586 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	NPAP1	Q9NZP6	1156 aa		7.52	□□□□□ -1.21
RACK1-222	ENST00000509535	NDUFAF4	Q9P032	175 aa		7.52	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms