RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 ARL8BQ9NVJ2 186 aa14.12□□□□□ -0.15
PDLIM5-212ENST00000509333 MED29Q9NX70 200 aa14.12□□□□□ -0.15
PDLIM5-212ENST00000509333 FAM53CQ9NYF3 392 aa14.12□□□□□ -0.15
PDLIM5-212ENST00000509333 CISD1Q9NZ45 108 aaKnown RBP14.12□□□□□ -0.15
PDLIM5-212ENST00000509333 AMDHD2Q9Y303 409 aa14.12□□□□□ -0.15
PDLIM5-212ENST00000509333 ABCD4O14678 606 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 FFAR1O14842 300 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 OR6A2O95222 327 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 IGF2P01344 180 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 RBM34P42696 430 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 UGT2B15P54855 530 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 IL1RL1Q01638 556 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 TBRG1Q3YBR2 411 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 GLYATQ6IB77 296 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 HMBOX1Q6NT76 420 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 ANKRD16Q6P6B7 361 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 KLHL17Q6TDP4 642 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 TMEM108Q6UXF1 575 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 SLC46A3Q7Z3Q1 461 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 TSEN54Q7Z6J9 526 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 PIK3C3Q8NEB9 887 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 KBTBD8Q8NFY9 601 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 SMAP2Q8WU79 429 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 TMEM255BQ8WV15 326 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 TMEM239Q8WW34 195 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 LRRC37BQ96QE4 947 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 CCL19Q99731 98 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 NELFAQ9H3P2 528 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 ZNF701Q9NV72 531 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 ZNF229Q9UJW7 825 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 MGAT4BQ9UQ53 548 aa14.11□□□□□ -0.15
PDLIM5-212ENST00000509333 ZNF726A6NNF4 738 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 E7EQL1 145 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 C11orf98E9PRG8 122 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 OVOL3O00110 214 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 KPNA4O00629 521 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 TMCC2O75069 709 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 CD8AP01732 235 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 HIST1H2ABP04908 130 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 SOD3P08294 240 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 CD99P14209 185 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 IFNGR1P15260 489 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 NCK1P16333 377 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 YAP1P46937 504 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 POU3F1Q03052 451 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 ST3GAL3Q11203 375 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 FOXD4Q12950 439 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 CAMK2DQ13557 499 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 PGGHGQ32M88 737 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 SHEQ5VZ18 495 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 HIST3H2AQ7L7L0 130 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 GPR137CQ8N3F9 429 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 WFDC11Q8NEX6 87 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 HIST1H2ACQ93077 130 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 ALKBH3Q96Q83 286 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 KCTD14Q9BQ13 255 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 CRLF2Q9HC73 371 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 OBP2BQ9NPH6 170 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 C20orf141Q9NUB4 165 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 LAMP3Q9UQV4 416 aa14.1□□□□□ -0.15
PDLIM5-212ENST00000509333 A0A096LPE4 126 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 ARPC4-TTLL3A0A0A6YYG9 625 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 A0A1W2PPZ6 126 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 J3KTA2 159 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 M0R1B8 84 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 M0R3G1 203 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 ARHGEF9O43307 516 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 AKAP8O43823 692 aaKnown RBP14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 ZNF682O95780 498 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 WNT11O96014 354 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 SERPINA1P01009 418 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 TSPAN19P0C672 248 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 PAX7P23759 505 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 SH3BGRP55822 239 aaPredicted RBP14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 LSM11P83369 360 aaKnown RBP eCLIP14.09□□□□□ -0.151e-7■■■■■ 32.8
PDLIM5-212ENST00000509333 LAPTM4AQ15012 233 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 FXNQ16595 210 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 CEACAM16Q2WEN9 425 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 IFI44LQ53G44 452 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 CARD17Q5XLA6 110 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 PRSS57Q6UWY2 283 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 SLC35D2Q76EJ3 337 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 OR6X1Q8NH79 312 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 PFN4Q8NHR9 129 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 TMEM171Q8WVE6 324 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 FBXW5Q969U6 566 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 SGTBQ96EQ0 304 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 GSX2Q9BZM3 304 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 SPAG4Q9NPE6 437 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 MAN2C1Q9NTJ4 1040 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 ADA2Q9NZK5 511 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 CD300AQ9UGN4 299 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 EGFL7Q9UHF1 273 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 TAGLN3Q9UI15 199 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 MED31Q9Y3C7 131 aa14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 MAGED1Q9Y5V3 778 aaPredicted RBP14.09□□□□□ -0.15
PDLIM5-212ENST00000509333 HTR3EA5X5Y0 456 aa14.08□□□□□ -0.16
PDLIM5-212ENST00000509333 BLOC1S5-TXNDC5H3BN57 136 aa14.08□□□□□ -0.16
PDLIM5-212ENST00000509333 DCTN3O75935 186 aa14.08□□□□□ -0.16
PDLIM5-212ENST00000509333 OR7A10O76100 309 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms