RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 RGS8P57771 180 aaPredicted RBP14.1□□□□□ -0.15
LMNA-222ENST00000508500 MTPNP58546 118 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 RAB35Q15286 201 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 MAPRE2Q15555 327 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 NPTX1Q15818 432 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 KLHL24Q6TFL4 600 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 C5orf46Q6UWT4 87 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 LINC00114Q6XXX2 140 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 H1FNTQ75WM6 255 aaPredicted RBP14.1□□□□□ -0.15
LMNA-222ENST00000508500 NET1Q7Z628 596 aaPredicted RBP14.1□□□□□ -0.15
LMNA-222ENST00000508500 DHDDSQ86SQ9 333 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 KRT73Q86Y46 540 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 SMYD1Q8NB12 490 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 CMTM5Q96DZ9 223 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 SLC47A1Q96FL8 570 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 OR2M2Q96R28 347 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 RHNO1Q9BSD3 238 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 LEF1Q9UJU2 399 aaPredicted RBP14.1□□□□□ -0.15
LMNA-222ENST00000508500 CAPN7Q9Y6W3 813 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.1□□□□□ -0.153e-7■■■■□ 22.3
LMNA-222ENST00000508500 SVEP1Q4LDE5 3571 aa14.1□□□□□ -0.15
LMNA-222ENST00000508500 M0QX08 132 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 M0R3H8 397 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 SEC14L2O76054 403 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 LYPD3O95274 346 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 IGKV3-15P01624 115 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 CECR9P0C854 216 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 GTF2E2P29084 291 aaKnown RBP14.09□□□□□ -0.15
LMNA-222ENST00000508500 GZMMP51124 257 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 NAAAQ02083 359 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 CEACAM16Q2WEN9 425 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 HMBOX1Q6NT76 420 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 RBM45Q8IUH3 476 aaKnown RBP14.09□□□□□ -0.15
LMNA-222ENST00000508500 ARMC8Q8IUR7 673 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 ADPRHL1Q8NDY3 354 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 ANKK1Q8NFD2 765 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 OR6S1Q8NH40 331 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 TSPEARQ8WU66 669 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 FBXO17Q96EF6 278 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 TXNDC15Q96J42 360 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 ZNF607Q96SK3 696 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 CGREF1Q99674 301 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 ARHGDIGQ99819 225 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 EMC6Q9BV81 110 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 TMEM27Q9HBJ8 222 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 TAGLN3Q9UI15 199 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 CORO2BQ9UQ03 480 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 NDUFAF1Q9Y375 327 aa14.09□□□□□ -0.15
LMNA-222ENST00000508500 PRORSD1PA6NEY8 169 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 SLC43A1O75387 559 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 CRYBA2P53672 197 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 UBE2NP61088 152 aaKnown RBP14.08□□□□□ -0.16
LMNA-222ENST00000508500 HGFACQ04756 655 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 KLF10Q13118 480 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 C1DQ13901 141 aaKnown RBP14.08□□□□□ -0.16
LMNA-222ENST00000508500 C3orf36Q3SXR2 165 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 WDR88Q6ZMY6 472 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 OR6T1Q8NGN1 323 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 RP9Q8TA86 221 aaKnown RBP14.08□□□□□ -0.16
LMNA-222ENST00000508500 C10orf105Q8TEF2 133 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 SORCS2Q96PQ0 1159 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 KATNB1Q9BVA0 655 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 KAT8Q9H7Z6 458 aaKnown RBP14.08□□□□□ -0.16
LMNA-222ENST00000508500 CRLF2Q9HC73 371 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 YAE1D1Q9NRH1 226 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 MED29Q9NX70 200 aa14.08□□□□□ -0.16
LMNA-222ENST00000508500 FBP2O00757 339 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 TLX2O43763 284 aaPredicted RBP14.07□□□□□ -0.16
LMNA-222ENST00000508500 SERPINB7O75635 380 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 F12P00748 615 aaPredicted RBP14.07□□□□□ -0.16
LMNA-222ENST00000508500 HOXB1P14653 301 aaPredicted RBP14.07□□□□□ -0.16
LMNA-222ENST00000508500 CBR1P16152 277 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 CD247P20963 164 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 EFNA4P52798 201 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 SH3BGRP55822 239 aaPredicted RBP14.07□□□□□ -0.16
LMNA-222ENST00000508500 CHRNB3Q05901 458 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 LOXL1Q08397 574 aaPredicted RBP14.07□□□□□ -0.16
LMNA-222ENST00000508500 RBBP4Q09028 425 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 ADIPOQQ15848 244 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 TMEM249Q2WGJ8 235 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 CARD17Q5XLA6 110 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 CLEC2AQ6UVW9 174 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 C20orf196Q8IYI0 205 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 GPR137CQ8N3F9 429 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 FAM169BQ8N8A8 192 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 C11orf65Q8NCR3 313 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 BHLHE22Q8NFJ8 381 aaPredicted RBP14.07□□□□□ -0.16
LMNA-222ENST00000508500 RNF217Q8TC41 542 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 TNFRSF13CQ96RJ3 184 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 MCHR1Q99705 422 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 TMEM43Q9BTV4 400 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 C1orf21Q9H246 121 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 NOX3Q9HBY0 568 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 CA10Q9NS85 328 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 B3GNT2Q9NY97 397 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 ANGPT4Q9Y264 503 aa14.07□□□□□ -0.16
LMNA-222ENST00000508500 SLC35F4A4IF30 521 aa14.06□□□□□ -0.16
LMNA-222ENST00000508500 VWC2LB2RUY7 222 aa14.06□□□□□ -0.16
LMNA-222ENST00000508500 M0R3G1 203 aa14.06□□□□□ -0.16
LMNA-222ENST00000508500 PLPP3O14495 311 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms