RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 BHLHE22Q8NFJ8 381 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 OR4F15Q8NGB8 312 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 OR6S1Q8NH40 331 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 STON2Q8WXE9 905 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 MOGAT1Q96PD6 335 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 ZNF607Q96SK3 696 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 EPYCQ99645 322 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 PLK3Q9H4B4 646 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 ZNF385DQ9H6B1 395 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 TMEM27Q9HBJ8 222 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 TMEM160Q9NX00 188 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 ANGPT4Q9Y264 503 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 IGHV2OR16-5A0A0B4J2B6 119 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 EVPLLA8MZ36 301 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 LRRN3E7EW58 273 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 M0R3H8 397 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 NDUFS8O00217 210 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 SERPINB7O75635 380 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 NQO1P15559 274 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 NR4A2P43354 598 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 PDLIM4P50479 330 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 MTPNP58546 118 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 IL1RL1Q01638 556 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 POU3F1Q03052 451 aaPredicted RBP11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 PUDPQ08623 228 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 NPRL3Q12980 569 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 SELPLGQ14242 412 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 RUNDC3AQ59EK9 446 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 CARD17Q5XLA6 110 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 PODNL1Q6PEZ8 512 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 VHLLQ6RSH7 139 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 NHLRC1Q6VVB1 395 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 MDP1Q86V88 176 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 RETREG3Q86VR2 466 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 RANBP3LQ86VV4 465 aaPredicted RBP11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 C20orf196Q8IYI0 205 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 DPP10Q8N608 796 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 SMYD1Q8NB12 490 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 C11orf65Q8NCR3 313 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 RNF217Q8TC41 542 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 DYDC1Q8WWB3 177 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 ARHGDIGQ99819 225 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 VRK1Q99986 396 aaPredicted RBP11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 PIMREGQ9BSJ6 248 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 TMEM43Q9BTV4 400 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 EMC6Q9BV81 110 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF442Q9H7R0 627 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 NOX3Q9HBY0 568 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 MED29Q9NX70 200 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 MRPL39Q9NYK5 338 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 SELENONQ9NZV5 590 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 LEF1Q9UJU2 399 aaPredicted RBP11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 SLC13A4Q9UKG4 626 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 CDC42EP3Q9UKI2 254 aa11.27□□□□□ -0.61
HMGCS1-205ENST00000508319 IGHV4-61A0A0C4DH41 118 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 M0R3G1 203 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 FMO6PO60774 539 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 IFNA2P01563 188 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 OPN1SWP03999 348 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 FAM157CP0CG43 387 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 THBS4P35443 961 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 ARR3P36575 388 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 LSM11P83369 360 aaKnown RBP eCLIP11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 GGTLC2Q14390 218 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 NPTX1Q15818 432 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 CYP51A1Q16850 503 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 CCDC36Q8IYA8 594 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 GPR32P1Q8NGA4 272 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 TXNDC15Q96J42 360 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 LRR1Q96L50 414 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 ANKRD27Q96NW4 1050 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 KCNK17Q96T54 332 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 CGREF1Q99674 301 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 MCHR1Q99705 422 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 ASPNQ9BXN1 380 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 RABEP2Q9H5N1 569 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 EVA1AQ9H8M9 152 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 MYOZ1Q9NP98 299 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 INTS9Q9NV88 658 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 USP22Q9UPT9 525 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 NOX1Q9Y5S8 564 aa11.26□□□□□ -0.61
HMGCS1-205ENST00000508319 LOC390937A0A1W2PQ73 354 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 SLC35F4A4IF30 521 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 hCG_2039718K7EN88 272 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 PLPP3O14495 311 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 CHP2O43745 196 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 LYPD3O95274 346 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 HLA-HP01893 362 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 THY1P04216 161 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 B4GALT1P15291 398 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 NPR2P20594 1047 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 IGFBP5P24593 272 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 CAPZA2P47755 286 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 GZMKP49863 264 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 PMS2P3Q13401 168 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 CAMK2DQ13557 499 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 DUSP7Q16829 419 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 CYB5R2Q6BCY4 276 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF613Q6PF04 617 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 LINC00114Q6XXX2 140 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms