RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 MMP1P03956 469 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 GSTM3P21266 225 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 CPN2P22792 545 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 GTF2E2P29084 291 aaKnown RBP3.1□□□□□ -1.91
DHFR-204ENST00000508282 RRM2P31350 389 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 FGF9P31371 208 aaPredicted RBP3.1□□□□□ -1.91
DHFR-204ENST00000508282 IFNA8P32881 189 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 CD80P33681 288 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 RFX3P48380 749 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 CD151P48509 253 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 DAP3P51398 398 aaKnown RBP3.1□□□□□ -1.91
DHFR-204ENST00000508282 KCNJ2P63252 427 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 VLDLRP98155 873 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 ZNF77Q15935 545 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 NKAIN1Q4KMZ8 207 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 FAM120AOSQ5T036 256 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 TWF2Q6IBS0 349 aaKnown RBP3.1□□□□□ -1.91
DHFR-204ENST00000508282 PPP1R27Q86WC6 154 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 MFSD6LQ8IWD5 586 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 SPERTQ8NA61 448 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 OR4F6Q8NGB9 312 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 FAM110BQ8TC76 370 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 ACMSDQ8TDX5 336 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 GPX8Q8TED1 209 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 SRSF12Q8WXF0 261 aaKnown RBP3.1□□□□□ -1.91
DHFR-204ENST00000508282 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.1□□□□□ -1.913e-18■■■■□ 25.9
DHFR-204ENST00000508282 C19orf60Q96EN9 201 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 SMIM14Q96QK8 99 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 MBOAT4Q96T53 435 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 ANKRD60Q9BZ19 345 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 ZNF385DQ9H6B1 395 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 TDRD3Q9H7E2 651 aaKnown RBP3.1□□□□□ -1.91
DHFR-204ENST00000508282 NIPAL2Q9H841 368 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 ZNF331Q9NQX6 463 aaPredicted RBP3.1□□□□□ -1.91
DHFR-204ENST00000508282 PTTG3PQ9NZH4 202 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 PHF11Q9UIL8 331 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 KLK12Q9UKR0 248 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 TMCO1Q9UM00 188 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 N6AMT1Q9Y5N5 214 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 KIF27Q86VH2 1401 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 A0A1W2PPV9 198 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 TCRBV9S1A1TA0A576 114 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 TUBAL3A6NHL2 446 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 PP2D1A8MPX8 630 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 IDSB3KWA1 339 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 TRDCB7Z8K6 153 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 ZNF701M0R085 212 aaPredicted RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 HIP1O00291 1037 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 NVLO15381 856 aaKnown RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 PRKYO43930 277 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 TBL1XO60907 577 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 CRYGCP07315 174 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 PLEKP08567 350 aaPredicted RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 UBTFL6P0CB48 400 aaPredicted RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 GCFC2P16383 781 aaKnown RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 COX5AP20674 150 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 GABRR1P24046 479 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 ANXA13P27216 316 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 HMOX2P30519 316 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 UQCRFS1P47985 274 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 BCAP31P51572 246 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 PRKXP51817 358 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 LIM2P55344 173 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 TLE4Q04727 773 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 VGLL4Q14135 290 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 MRPL23Q16540 153 aaKnown RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 FAM199XQ6PEV8 388 aaPredicted RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 CCDC137Q6PK04 289 aaKnown RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 VTCN1Q7Z7D3 282 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 OR2L13Q8N349 312 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 OR52H1Q8NGJ2 320 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 GPR151Q8TDV0 419 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 HTR3CQ8WXA8 447 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 STMN2Q93045 179 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 IL22RA2Q969J5 263 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 FGGYQ96C11 551 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 RNF2Q99496 336 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 ZNF670Q9BS34 389 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 TEKT3Q9BXF9 490 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 ELOVL6Q9H5J4 265 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 REEP4Q9H6H4 257 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 MRPS30Q9NP92 439 aaKnown RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 CCNB1IP1Q9NPC3 277 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 PAK1IP1Q9NWT1 392 aaPredicted RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 MARCH5Q9NX47 278 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 LYARQ9NX58 379 aaKnown RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 SAMD4AQ9UPU9 718 aaKnown RBP3.09□□□□□ -1.91
DHFR-204ENST00000508282 CLSPNQ9HAW4 1339 aa3.09□□□□□ -1.91
DHFR-204ENST00000508282 SMCO2A6NFE2 343 aa3.08□□□□□ -1.92
DHFR-204ENST00000508282 TEX46H3BTG2 121 aa3.08□□□□□ -1.92
DHFR-204ENST00000508282 KIF2AO00139 706 aaPredicted RBP3.08□□□□□ -1.92
DHFR-204ENST00000508282 POLR3GO15318 223 aaPredicted RBP3.08□□□□□ -1.92
DHFR-204ENST00000508282 GPX5O75715 221 aa3.08□□□□□ -1.92
DHFR-204ENST00000508282 GNA14O95837 355 aa3.08□□□□□ -1.92
DHFR-204ENST00000508282 LGALS2P05162 132 aa3.08□□□□□ -1.92
DHFR-204ENST00000508282 IVLP07476 585 aa3.08□□□□□ -1.92
DHFR-204ENST00000508282 SRMP19623 302 aa3.08□□□□□ -1.92
DHFR-204ENST00000508282 VDAC1P21796 283 aa3.08□□□□□ -1.92
DHFR-204ENST00000508282 U2AF2P26368 475 aaKnown RBP eCLIP3.08□□□□□ -1.92
DHFR-204ENST00000508282 ADORA2BP29275 332 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms