RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 HMBOX1Q6NT76 420 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 DPY19L2P2Q6ZN68 376 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 POMGNT2Q8NAT1 580 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 NAXEQ8NCW5 288 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 FNDC8Q8TC99 324 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 STARD4Q96DR4 205 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 POLDIP3Q9BY77 421 aaKnown RBP17.83■□□□□ 0.44
USP53-203ENST00000507597 OR52D1Q9H346 318 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 TXNIPQ9H3M7 391 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 C8orf4Q9NR00 106 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 B3GAT1Q9P2W7 334 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 GRHPRQ9UBQ7 328 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 CDH10Q9Y6N8 788 aa17.83■□□□□ 0.44
USP53-203ENST00000507597 SMG1Q96Q15 3661 aaKnown RBP17.83■□□□□ 0.44
USP53-203ENST00000507597 ARHGAP21Q5T5U3 1957 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 A6NIZ1 184 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 CENPBD1B2RD01 187 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 EEF1E1-BLOC1S5C9J1V9 151 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 EEF1E1O43324 174 aaKnown RBP17.82■□□□□ 0.44
USP53-203ENST00000507597 IDH3BO43837 385 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 ZG16O60844 167 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 CLDN14O95500 239 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 F13BP05160 661 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 APEHP13798 732 aaKnown RBP17.82■□□□□ 0.44
USP53-203ENST00000507597 KLK2P20151 261 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 OR3A2P47893 321 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 RAP1BP61224 184 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 RAP1AP62834 184 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 NIPAL3Q6P499 406 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 ZNF620Q6ZNG0 422 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 TMEM179BQ7Z7N9 219 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 MEX3DQ86XN8 651 aaKnown RBP17.82■□□□□ 0.44
USP53-203ENST00000507597 EPHX4Q8IUS5 362 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 OR6X1Q8NH79 312 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 MOSPD2Q8NHP6 518 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 TEX47Q8TBZ9 253 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 SSC4DQ8WTU2 575 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 EME1Q96AY2 570 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 ZNF775Q96BV0 537 aaPredicted RBP17.82■□□□□ 0.44
USP53-203ENST00000507597 GPX7Q96SL4 187 aaPredicted RBP17.82■□□□□ 0.44
USP53-203ENST00000507597 GABARAPL1Q9H0R8 117 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 C12orf49Q9H741 205 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 MCCC2Q9HCC0 563 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 PAPOLBQ9NRJ5 636 aaKnown RBP17.82■□□□□ 0.44
USP53-203ENST00000507597 IL20Q9NYY1 176 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 ING1Q9UK53 422 aaPredicted RBP17.82■□□□□ 0.44
USP53-203ENST00000507597 OAZ3Q9UMX2 235 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 BAIAP2Q9UQB8 552 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 MPDZO75970 2070 aa17.82■□□□□ 0.44
USP53-203ENST00000507597 NBASA2RRP1 2371 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 SAC3D1A6NKF1 404 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 H3BN98 237 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 XKRYO14609 159 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 IMPA2O14732 288 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 TRAF3IP2O43734 574 aaPredicted RBP17.81■□□□□ 0.44
USP53-203ENST00000507597 OSMP13725 252 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 ANPEPP15144 967 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 IFNGR1P15260 489 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 PRKACGP22612 351 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 NOS3P29474 1203 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 ASCL1P50553 236 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 RPL27P61353 136 aaKnown RBP17.81■□□□□ 0.44
USP53-203ENST00000507597 VWA1Q6PCB0 445 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 NCCRP1Q6ZVX7 275 aaPredicted RBP17.81■□□□□ 0.44
USP53-203ENST00000507597 NUFIP2Q7Z417 695 aaKnown RBP17.81■□□□□ 0.44
USP53-203ENST00000507597 BTLAQ7Z6A9 289 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 UBE2J2Q8N2K1 259 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 ZIC4Q8N9L1 334 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 ZNF566Q969W8 418 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 SLC25A44Q96H78 314 aaPredicted RBP17.81■□□□□ 0.44
USP53-203ENST00000507597 LRR1Q96L50 414 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 ZNF385AQ96PM9 386 aaKnown RBP17.81■□□□□ 0.44
USP53-203ENST00000507597 GPA33Q99795 319 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 SLCO5A1Q9H2Y9 848 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 KRT84Q9NSB2 600 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 ELOVL5Q9NYP7 299 aa17.81■□□□□ 0.44
USP53-203ENST00000507597 SPENQ96T58 3664 aaKnown RBP17.81■□□□□ 0.44
USP53-203ENST00000507597 SLC35F4A4IF30 521 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 PYCARD-AS1I3L0S3 204 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 AHCYL1O43865 530 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 HPRP00739 348 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 IGHG1P01857 330 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 IGHMP01871 453 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 PEX19P40855 299 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 RAD23AP54725 363 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 BIDP55957 195 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 ACKR1Q16570 336 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 FBXW9Q5XUX1 488 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 FAHD1Q6P587 224 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 ZBTB49Q6ZSB9 765 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 GPR137CQ8N3F9 429 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 ITLN2Q8WWU7 325 aaPredicted RBP17.8■□□□□ 0.44
USP53-203ENST00000507597 NIPSNAP1Q9BPW8 284 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 USB1Q9BQ65 265 aaKnown RBP17.8■□□□□ 0.44
USP53-203ENST00000507597 KATNB1Q9BVA0 655 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 IFT27Q9BW83 186 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 LINC00470Q9BZP3 86 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 TBC1D23Q9NUY8 699 aa17.8■□□□□ 0.44
USP53-203ENST00000507597 A8MXE2 369 aa17.79■□□□□ 0.44
USP53-203ENST00000507597 HLA-DOBP13765 273 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms