RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FASTKD3Q14CZ7 662 aaKnown RBP6.01□□□□□ -1.45
VCAN-207ENST00000507162 RASA2Q15283 850 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 GGTA1PQ4G0N0 100 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 CLEC6AQ6EIG7 209 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 METTL2BQ6P1Q9 378 aaKnown RBP6.01□□□□□ -1.45
VCAN-207ENST00000507162 KLC3Q6P597 504 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 ZCCHC12Q6PEW1 402 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 ADAMTSL5Q6ZMM2 481 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 VASH1Q7L8A9 365 aaPredicted RBP6.01□□□□□ -1.45
VCAN-207ENST00000507162 GRINAQ7Z429 371 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 LRRC28Q86X40 367 aaPredicted RBP6.01□□□□□ -1.45
VCAN-207ENST00000507162 EPHX4Q8IUS5 362 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 CTAGE3PQ8IX95 158 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 KDM8Q8N371 416 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 GALNT4Q8N4A0 578 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 KLHDC1Q8N7A1 406 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 SCCPDHQ8NBX0 429 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 CPEB3Q8NE35 698 aaKnown RBP6.01□□□□□ -1.45
VCAN-207ENST00000507162 ZFP28Q8NHY6 868 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 GRK7Q8WTQ7 553 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 GEMIN6Q8WXD5 167 aaKnown RBP6.01□□□□□ -1.45
VCAN-207ENST00000507162 GATAD2BQ8WXI9 593 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 LRTOMTQ8WZ04 291 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 MS4A14Q96JA4 679 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 RHOXF2Q9BQY4 288 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 NUDT16L1Q9BRJ7 211 aaKnown RBP6.01□□□□□ -1.45
VCAN-207ENST00000507162 ACPTQ9BZG2 426 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 LINC00470Q9BZP3 86 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 PIGUQ9H490 435 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 ACOXLQ9NUZ1 547 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 ADPRHL2Q9NX46 363 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 PCDHGB4Q9UN71 923 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 USH1CQ9Y6N9 552 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 CSMD3Q7Z407 3707 aa6□□□□□ -1.45
VCAN-207ENST00000507162 IGLV3-9A0A075B6K5 115 aa6□□□□□ -1.45
VCAN-207ENST00000507162 A0A0U1RQK1 487 aa6□□□□□ -1.45
VCAN-207ENST00000507162 KIR2DS1A0A191URI9 304 aa6□□□□□ -1.45
VCAN-207ENST00000507162 ZC3H12DA2A288 527 aaKnown RBP6□□□□□ -1.45
VCAN-207ENST00000507162 BTBD17A6NE02 478 aa6□□□□□ -1.45
VCAN-207ENST00000507162 AQP7P3A6NL99 342 aa6□□□□□ -1.45
VCAN-207ENST00000507162 NPIPB9F8W1W9 429 aa6□□□□□ -1.45
VCAN-207ENST00000507162 RPL36A-HNRNPH2H7BZ11 118 aa6□□□□□ -1.45
VCAN-207ENST00000507162 M0R3G1 203 aa6□□□□□ -1.45
VCAN-207ENST00000507162 DNAJA2O60884 412 aa6□□□□□ -1.45
VCAN-207ENST00000507162 SLC43A1O75387 559 aa6□□□□□ -1.45
VCAN-207ENST00000507162 HMGN2P05204 90 aaKnown RBP6□□□□□ -1.45
VCAN-207ENST00000507162 WNT2P09544 360 aa6□□□□□ -1.45
VCAN-207ENST00000507162 PATE4P0C8F1 98 aa6□□□□□ -1.45
VCAN-207ENST00000507162 CCL2P13500 99 aa6□□□□□ -1.45
VCAN-207ENST00000507162 ZNF250P15622 560 aa6□□□□□ -1.45
VCAN-207ENST00000507162 HMOX2P30519 316 aa6□□□□□ -1.45
VCAN-207ENST00000507162 STX2P32856 288 aa6□□□□□ -1.45
VCAN-207ENST00000507162 RPL4P36578 427 aaKnown RBP6□□□□□ -1.45
VCAN-207ENST00000507162 ETV4P43268 484 aa6□□□□□ -1.45
VCAN-207ENST00000507162 GSTM5P46439 218 aa6□□□□□ -1.45
VCAN-207ENST00000507162 PAX2Q02962 417 aa6□□□□□ -1.45
VCAN-207ENST00000507162 RBBP4Q09028 425 aa6□□□□□ -1.45
VCAN-207ENST00000507162 ZMYND11Q15326 602 aa6□□□□□ -1.45
VCAN-207ENST00000507162 ARHGAP11BQ3KRB8 267 aa6□□□□□ -1.45
VCAN-207ENST00000507162 TMEM155Q4W5P6 130 aa6□□□□□ -1.45
VCAN-207ENST00000507162 SPRNQ5BIV9 151 aa6□□□□□ -1.45
VCAN-207ENST00000507162 FAM209AQ5JX71 171 aa6□□□□□ -1.45
VCAN-207ENST00000507162 GRTP1Q5TC63 336 aa6□□□□□ -1.45
VCAN-207ENST00000507162 ZNF813Q6ZN06 617 aa6□□□□□ -1.45
VCAN-207ENST00000507162 EIF3MQ7L2H7 374 aaKnown RBP6□□□□□ -1.45
VCAN-207ENST00000507162 CENPLQ8N0S6 344 aaPredicted RBP6□□□□□ -1.45
VCAN-207ENST00000507162 MUC20Q8N307 709 aaPredicted RBP6□□□□□ -1.45
VCAN-207ENST00000507162 ZNF519Q8TB69 540 aa6□□□□□ -1.45
VCAN-207ENST00000507162 METTL6Q8TCB7 284 aa6□□□□□ -1.45
VCAN-207ENST00000507162 ZG16BQ96DA0 208 aa6□□□□□ -1.45
VCAN-207ENST00000507162 THOC1Q96FV9 657 aaKnown RBP6□□□□□ -1.45
VCAN-207ENST00000507162 MAP6Q96JE9 813 aa6□□□□□ -1.45
VCAN-207ENST00000507162 ZNF75AQ96N20 296 aa6□□□□□ -1.45
VCAN-207ENST00000507162 STACQ99469 402 aa6□□□□□ -1.45
VCAN-207ENST00000507162 PRPF18Q99633 342 aaKnown RBP6□□□□□ -1.45
VCAN-207ENST00000507162 TAPBPLQ9BX59 468 aa6□□□□□ -1.45
VCAN-207ENST00000507162 ACTRT3Q9BYD9 372 aa6□□□□□ -1.45
VCAN-207ENST00000507162 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
VCAN-207ENST00000507162 TRIM15Q9C019 465 aa6□□□□□ -1.45
VCAN-207ENST00000507162 PPA2Q9H2U2 334 aa6□□□□□ -1.45
VCAN-207ENST00000507162 PIF1Q9H611 641 aa6□□□□□ -1.45
VCAN-207ENST00000507162 RNF121Q9H920 327 aa6□□□□□ -1.45
VCAN-207ENST00000507162 DUSP22Q9NRW4 184 aa6□□□□□ -1.45
VCAN-207ENST00000507162 ZCCHC3Q9NUD5 404 aaKnown RBP6□□□□□ -1.45
VCAN-207ENST00000507162 TMEM106BQ9NUM4 274 aa6□□□□□ -1.45
VCAN-207ENST00000507162 SH3BP4Q9P0V3 963 aa6□□□□□ -1.45
VCAN-207ENST00000507162 FBLN5Q9UBX5 448 aa6□□□□□ -1.45
VCAN-207ENST00000507162 RCE1Q9Y256 329 aa6□□□□□ -1.45
VCAN-207ENST00000507162 LRCH1Q9Y2L9 728 aa6□□□□□ -1.45
VCAN-207ENST00000507162 FAM96BQ9Y3D0 163 aa6□□□□□ -1.45
VCAN-207ENST00000507162 POLR3HQ9Y535 204 aaPredicted RBP6□□□□□ -1.45
VCAN-207ENST00000507162 NUP214P35658 2090 aaPredicted RBP5.99□□□□□ -1.45
VCAN-207ENST00000507162 CENPVL1A0A0U1RR11 272 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 CENPVL3A0A0U1RRI6 287 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 PLSCR5A0PG75 271 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 LIPT2A6NK58 231 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 CEACAM18A8MTB9 384 aa5.99□□□□□ -1.45
VCAN-207ENST00000507162 ZNF99A8MXY4 864 aaPredicted RBP5.99□□□□□ -1.45
VCAN-207ENST00000507162 F5H0A9 414 aaPredicted RBP5.99□□□□□ -1.45
VCAN-207ENST00000507162 TM9SF1O15321 606 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms