RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TTMPQ5BVD1 217 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 CYB5R2Q6BCY4 276 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 ZNF627Q7L945 461 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 SLC46A3Q7Z3Q1 461 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 C20orf196Q8IYI0 205 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 TMEM123Q8N131 208 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 ZNF525Q8N782 197 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 SPATA3Q8NHX4 192 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 MPP4Q96JB8 637 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 OR2M2Q96R28 347 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 CGREF1Q99674 301 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 PIMREGQ9BSJ6 248 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 SLC19A3Q9BZV2 496 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 PLK3Q9H4B4 646 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 SPEF1Q9Y4P9 236 aa12.55□□□□□ -0.4
HMGCS1-203ENST00000507004 A0A096LNT2 108 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 A0A096LPE4 126 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 A0A1W2PPZ6 126 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 OR6A2O95222 327 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 BGLAPP02818 100 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 OR4A8P0C604 315 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 AQP1P29972 269 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 LSM11P83369 360 aaKnown RBP eCLIP12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 POU3F1Q03052 451 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 NFYCQ13952 458 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 MST1LQ2TV78 715 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 C6orf52Q5T4I8 152 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 LINGO2Q7L985 606 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 C10orf53Q8N6V4 93 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 OR6N1Q8NGY5 312 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 OR5J2Q8NH18 312 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 SLC26A7Q8TE54 656 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 NEU4Q8WWR8 484 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 MCHR1Q99705 422 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 ARHGDIGQ99819 225 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 NELFAQ9H3P2 528 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 IKZF5Q9H5V7 419 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 POFUT2Q9Y2G5 429 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 ARFGEF3Q5TH69 2177 aa12.54□□□□□ -0.4
HMGCS1-203ENST00000507004 KIAA1324LA8MWY0 1029 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 MS4A18H0YCH9 400 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 M0QX08 132 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 MGRN1O60291 552 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 NPPAP01160 153 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 NPR2P20594 1047 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 LSP1P33241 339 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 PCGF2P35227 344 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 IDH3GP51553 393 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 CDH12P55289 794 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 LGALS3BPQ08380 585 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 CYLC2Q14093 348 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 ADIPOQQ15848 244 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 MS4A18Q3C1V0 323 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 GLIPR1L2Q4G1C9 344 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 TTC33Q6PID6 262 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 UGT2A3Q6UWM9 527 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 DPPA2Q7Z7J5 298 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 C10orf111Q8N326 155 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 ULBP2Q9BZM5 246 aa12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 POLR2J2Q9GZM3 115 aaKnown RBP12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 POLR2J3Q9H1A7 115 aaKnown RBP12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 KAT8Q9H7Z6 458 aaKnown RBP12.53□□□□□ -0.4
HMGCS1-203ENST00000507004 SLC35F4A4IF30 521 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 TRAPPC13A5PLN9 417 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 M0R3G1 203 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 PLPP3O14495 311 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 EDF1O60869 148 aaKnown RBP12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 UBL3O95164 117 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 IFNA14P01570 189 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 FAM157CP0CG43 387 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 AHCYP23526 432 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 CAPZA2P47755 286 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 EVX1P49640 407 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 RPS23P62266 143 aaKnown RBP12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 ZP4Q12836 540 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 MAPRE2Q15555 327 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 GSG1Q2KHT4 349 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 COQ5Q5HYK3 327 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 LINC00114Q6XXX2 140 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 HDDC2Q7Z4H3 204 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 PTOV1Q86YD1 416 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 SMYD1Q8NB12 490 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 KCNK17Q96T54 332 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 VRK1Q99986 396 aaPredicted RBP12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 PCDHAC1Q9H158 963 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF385DQ9H6B1 395 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 SEC14L4Q9UDX3 406 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 ADAM21Q9UKJ8 722 aa12.52□□□□□ -0.41
HMGCS1-203ENST00000507004 IGHV2OR16-5A0A0B4J2B6 119 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 VWC2LB2RUY7 222 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 TPST2O60704 377 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 HIST1H2ABP04908 130 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 ADORA3P0DMS8 318 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 CD247P20963 164 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 THBS2P35442 1172 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 NR4A2P43354 598 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 CSNK1A1P48729 337 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 NPRL3Q12980 569 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 NPTX1Q15818 432 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 DUSP7Q16829 419 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms