RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 OR4C15Q8NGM1 316 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 IPCEF1Q8WWN9 437 aaPredicted RBP7.51□□□□□ -1.21
PDGFC-205ENST00000506880 SLC25A44Q96H78 314 aaPredicted RBP7.51□□□□□ -1.21
PDGFC-205ENST00000506880 PRRG3Q9BZD7 231 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF556Q9HAH1 456 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 INIPQ9NRY2 104 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 ASB6Q9NWX5 421 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 IL20Q9NYY1 176 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 B3GAT1Q9P2W7 334 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 ING1Q9UK53 422 aaPredicted RBP7.51□□□□□ -1.21
PDGFC-205ENST00000506880 EDARQ9UNE0 448 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF726A6NNF4 738 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF587BE7ETH6 402 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 H0YC42 278 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 MS4A18H0YCH9 400 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 C16orf97H3BN30 126 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 hCG_2039718K7EN88 272 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 PDLIM1O00151 329 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 TRAF3IP2O43734 574 aaPredicted RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 OR10H3O60404 316 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 PTP4A3O75365 173 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 BCL10O95999 233 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 CD14P08571 375 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 CDH2P19022 906 aaPredicted RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 TNFRSF1BP20333 461 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 BMP5P22003 454 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 TCEA1P23193 301 aaKnown RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 SLC6A6P31641 620 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 MSX2P35548 267 aaPredicted RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 RNF144AP50876 292 aaPredicted RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 BLVRAP53004 296 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 TPD52P55327 224 aaPredicted RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 RPL27P61353 136 aaKnown RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 HIST3H3Q16695 136 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 MS4A18Q3C1V0 323 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 ALG10Q5BKT4 473 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 TIMM23BQ5SRD1 257 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 THEM4Q5T1C6 240 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 SMARCD3Q6STE5 483 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 AAED1Q7RTV5 226 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 BTLAQ7Z6A9 289 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 TSPYL5Q86VY4 417 aaPredicted RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 ZDHHC13Q8IUH4 622 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 TUSC5Q8IXB3 177 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 FAM86B1Q8N7N1 296 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 CNEP1R1Q8N9A8 125 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 RELL2Q8NC24 303 aaPredicted RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 NAXEQ8NCW5 288 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 OR52L1Q8NGH7 329 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 OR5K1Q8NHB7 308 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 GIPC3Q8TF64 312 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 ROBO4Q8WZ75 1007 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 HSD17B8Q92506 261 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 STMN2Q93045 179 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF566Q969W8 418 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 UTP4Q969X6 686 aaKnown RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 SLC25A36Q96CQ1 311 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 C14orf79Q96F83 325 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 RDH12Q96NR8 316 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 MOGAT1Q96PD6 335 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 RBM24Q9BX46 236 aaKnown RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 GABARAPL1Q9H0R8 117 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 HEATR1Q9H583 2144 aaKnown RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF226Q9NYT6 803 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 TAS2R5Q9NYW4 299 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 GMPR2Q9P2T1 348 aaKnown RBP7.5□□□□□ -1.21
PDGFC-205ENST00000506880 TNFRSF10DQ9UBN6 386 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 SIGLEC7Q9Y286 467 aa7.5□□□□□ -1.21
PDGFC-205ENST00000506880 PLCE1Q9P212 2302 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 UNC119BA6NIH7 251 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 KDM4EB2RXH2 506 aaPredicted RBP7.49□□□□□ -1.21
PDGFC-205ENST00000506880 EEF1E1-BLOC1S5C9J1V9 151 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 J3KTA2 159 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 EEF1E1O43324 174 aaKnown RBP7.49□□□□□ -1.21
PDGFC-205ENST00000506880 RNF13O43567 381 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 E2F6O75461 281 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 POU2F1P14859 743 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 CCNA2P20248 432 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 NPR2P20594 1047 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 SDHAP31040 664 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 GUCA1AP43080 201 aaPredicted RBP7.49□□□□□ -1.21
PDGFC-205ENST00000506880 PTDSS1P48651 473 aaKnown RBP7.49□□□□□ -1.21
PDGFC-205ENST00000506880 NR1H2P55055 460 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 ESRRGP62508 458 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 LTBQ06643 244 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 RPL18Q07020 188 aaKnown RBP7.49□□□□□ -1.21
PDGFC-205ENST00000506880 SRSF1Q07955 248 aaKnown RBP eCLIP7.49□□□□□ -1.21
PDGFC-205ENST00000506880 DAZAP2Q15038 168 aaPredicted RBP7.49□□□□□ -1.21
PDGFC-205ENST00000506880 C10orf128Q5T292 105 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 SFRP5Q5T4F7 317 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 DNM1P34Q6PK57 102 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 CASP12Q6UXS9 341 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF620Q6ZNG0 422 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 SLC35D2Q76EJ3 337 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 ZER1Q7Z7L7 766 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 GPAT4Q86UL3 456 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 EPHX4Q8IUS5 362 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 DMRTC2Q8IXT2 367 aaPredicted RBP7.49□□□□□ -1.21
PDGFC-205ENST00000506880 C20orf196Q8IYI0 205 aa7.49□□□□□ -1.21
PDGFC-205ENST00000506880 C1orf174Q8IYL3 243 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms