RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 SIGLEC7Q9Y286 467 aa13.13□□□□□ -0.31
DSP-203ENST00000506617 ANKHD1Q8IWZ3 2542 aaKnown RBP13.12□□□□□ -0.31
DSP-203ENST00000506617 OR6C65A6NJZ3 312 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 LRRN3E7EW58 273 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 MGRN1O60291 552 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 SMNDC1O75940 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
DSP-203ENST00000506617 PLGP00747 810 aaPredicted RBP13.12□□□□□ -0.31
DSP-203ENST00000506617 ADORA3P0DMS8 318 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 APEHP13798 732 aaKnown RBP13.12□□□□□ -0.31
DSP-203ENST00000506617 ANPEPP15144 967 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 ZNF43P17038 809 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 GPR4P46093 362 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 PCYT1AP49585 367 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 RPL18Q07020 188 aaKnown RBP13.12□□□□□ -0.31
DSP-203ENST00000506617 FOXD4Q12950 439 aaPredicted RBP13.12□□□□□ -0.31
DSP-203ENST00000506617 SNTB1Q13884 538 aaKnown RBP13.12□□□□□ -0.31
DSP-203ENST00000506617 TMEM201Q5SNT2 666 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 CREB3L2Q70SY1 520 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 HDDC2Q7Z4H3 204 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 BTLAQ7Z6A9 289 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 GALNT5Q7Z7M9 940 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 PARP8Q8N3A8 854 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 OR9Q2Q8NGE9 314 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 OR6K3Q8NGY3 331 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 STARD4Q96DR4 205 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 DNAJA3Q96EY1 480 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 LRRC46Q96FV0 321 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 GPA33Q99795 319 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 PIGMQ9H3S5 423 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 IL20Q9NYY1 176 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 OAZ3Q9UMX2 235 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 RCE1Q9Y256 329 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 EMC9Q9Y3B6 208 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 FLVCR1Q9Y5Y0 555 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 CENPEQ02224 2701 aa13.12□□□□□ -0.31
DSP-203ENST00000506617 FREM1Q5H8C1 2179 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 IGHV3-15A0A0B4J1V0 119 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 CENPBD1B2RD01 187 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 BLOC1S5-TXNDC5H3BN57 136 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 AKAP8O43823 692 aaKnown RBP13.11□□□□□ -0.31
DSP-203ENST00000506617 NDUFB2O95178 105 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 CNOT4O95628 575 aaKnown RBP13.11□□□□□ -0.31
DSP-203ENST00000506617 IGHMP01871 453 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 CD8BP10966 210 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 ZNF23P17027 643 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 PTNP21246 168 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 AGTR1P30556 359 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 PPP1R8Q12972 351 aaKnown RBP13.11□□□□□ -0.31
DSP-203ENST00000506617 RCN1Q15293 331 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 RFX4Q33E94 735 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 ALG10Q5BKT4 473 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 SMARCD3Q6STE5 483 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 DPY19L2P2Q6ZN68 376 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 EPHX4Q8IUS5 362 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 UEVLDQ8IX04 471 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 ZNF295-AS1Q8N0V1 137 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 ZIC4Q8N9L1 334 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 LRRC75AQ8NAA5 344 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 ADAD1Q96M93 576 aaKnown RBP13.11□□□□□ -0.31
DSP-203ENST00000506617 TNFRSF13CQ96RJ3 184 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 RBM4BQ9BQ04 359 aaKnown RBP13.11□□□□□ -0.31
DSP-203ENST00000506617 C9orf16Q9BUW7 83 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 RBM4Q9BWF3 364 aaKnown RBP13.11□□□□□ -0.31
DSP-203ENST00000506617 RBM24Q9BX46 236 aaKnown RBP13.11□□□□□ -0.31
DSP-203ENST00000506617 OPN3Q9H1Y3 402 aaPredicted RBP13.11□□□□□ -0.31
DSP-203ENST00000506617 SEMA6AQ9H2E6 1030 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 MCCC2Q9HCC0 563 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 PLSCR4Q9NRQ2 329 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 INIPQ9NRY2 104 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 GALNT8Q9NY28 637 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 USE1Q9NZ43 259 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 SEC14L4Q9UDX3 406 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 FOXD3Q9UJU5 478 aaPredicted RBP13.11□□□□□ -0.31
DSP-203ENST00000506617 CDH10Q9Y6N8 788 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 NAV2Q8IVL1 2488 aa13.11□□□□□ -0.31
DSP-203ENST00000506617 CELSR2Q9HCU4 2923 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 A0A1W2PRG6 482 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 A8MXE2 369 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 IMPA2O14732 288 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 MSTNO14793 375 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 CASQ2O14958 399 aaPredicted RBP13.1□□□□□ -0.31
DSP-203ENST00000506617 TRAF3IP2O43734 574 aaPredicted RBP13.1□□□□□ -0.31
DSP-203ENST00000506617 IDH3BO43837 385 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 RAMP1O60894 148 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 BAG2O95816 211 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 HPRP00739 348 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 KLK2P20151 261 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 AQP2P41181 271 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 DAP3P51398 398 aaKnown RBP13.1□□□□□ -0.31
DSP-203ENST00000506617 PPP2R2BQ00005 443 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 C1DQ13901 141 aaKnown RBP13.1□□□□□ -0.31
DSP-203ENST00000506617 LAPTM4AQ15012 233 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 FAM205BPQ63HN1 556 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 KDM4DQ6B0I6 523 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 ZNF620Q6ZNG0 422 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 GPAT4Q86UL3 456 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 STK32CQ86UX6 486 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 TUSC5Q8IXB3 177 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 ATG16L2Q8NAA4 619 aa13.1□□□□□ -0.31
DSP-203ENST00000506617 OR13C2Q8NGS9 318 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms