RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PXKQ7Z7A4 578 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 C12orf40Q86WS4 652 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 SLC35F2Q8IXU6 374 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 LINC01555Q8NAE3 123 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 PLPP7Q8NBV4 271 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 SMIM19Q96E16 107 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 BIN3Q9NQY0 253 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 PRMT8Q9NR22 394 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-208ENST00000504387 COA4Q9NYJ1 87 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 WDFY3Q8IZQ1 3526 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 ANKRD20A5PA0PJZ0 165 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 OR14I1A6ND48 311 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 ALOX12BO75342 701 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 AKR1C4P17516 323 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 ADRA2CP18825 462 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 HOXA1P49639 335 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-208ENST00000504387 CCR4P51679 360 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 OR2B8PP59922 312 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 HTRA4P83105 476 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-208ENST00000504387 SMCO1Q147U7 214 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 UBXN2BQ14CS0 331 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 SMAD2Q15796 467 aaKnown RBP6.98□□□□□ -1.29
NEDD9-208ENST00000504387 KRBOX4Q5JUW0 171 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 PRAMEF17Q5VTA0 474 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 PSRC1Q6PGN9 363 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-208ENST00000504387 MTSS1LQ765P7 747 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 SPAG16Q8N0X2 631 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 FAM174AQ8TBP5 190 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 PHOSPHO1Q8TCT1 267 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 SELENOIQ9C0D9 397 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 IGFLR1Q9H665 355 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 MED31Q9Y3C7 131 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 TRIOO75962 3097 aa6.98□□□□□ -1.29
NEDD9-208ENST00000504387 TRAV14DV4A0A0A6YYC5 116 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ELOA3DA6NLF2 546 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 MCIDASD6RGH6 385 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 J3QRE1 110 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ZNF254O75437 659 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 WDPCPO95876 746 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ASGR2P07307 311 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 DCNP07585 359 aaKnown RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 LAG3P18627 525 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 DPP4P27487 766 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 CSNK1G2P78368 415 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 PON3Q15166 354 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 DHCR24Q15392 516 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ELOA3BQ3SY89 546 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ARHGAP40Q5TG30 622 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 LRRC69Q6ZNQ3 347 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ETFBKMTQ8IXQ9 262 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 PM20D2Q8IYS1 436 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 GTPBP8Q8N3Z3 284 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ZNF676Q8N7Q3 588 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 FAM71CQ8NEG0 241 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ELOA3Q8NG57 546 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 OR4E2Q8NGC2 313 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 PPP1R1CQ8WVI7 109 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ROBO4Q8WZ75 1007 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 FAM46BQ96A09 425 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 PRSS27Q9BQR3 290 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 CMC2Q9NRP2 79 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 AKAP7Q9P0M2 348 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 DEC1Q9P2X7 70 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 NCDNQ9UBB6 729 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 PLXNB3Q9ULL4 1909 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 A0A1W2PPE3 182 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 DCDC2BA2VCK2 349 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ZNF879B4DU55 563 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 PRRT4C9JH25 899 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ACOT7O00154 380 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 EMC8O43402 210 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ADAM11O75078 769 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 OR2A4O95047 310 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 F13BP05160 661 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 PI3P19957 117 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 HIST1H1TP22492 207 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 NDUFS1P28331 727 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ACSM1Q08AH1 577 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 GAS6Q14393 721 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 SLC22A6Q4U2R8 563 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 C3orf33Q6P1S2 294 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 STAC2Q6ZMT1 411 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 TMPPEQ6ZT21 453 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 SLC35D2Q76EJ3 337 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 SLC29A4Q7RTT9 530 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 RANBP3LQ86VV4 465 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 MCATQ8IVS2 390 aaKnown RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 OR8D1Q8WZ84 308 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 TMEM106AQ96A25 262 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ARRDC3Q96B67 414 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 CYYR1Q96J86 154 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 ADAD1Q96M93 576 aaKnown RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 OR2A7Q96R45 310 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 MYADMQ96S97 322 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 CPEB1Q9BZB8 566 aaKnown RBP6.97□□□□□ -1.29
NEDD9-208ENST00000504387 SPHK1Q9NYA1 384 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 MIOXQ9UGB7 285 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 DPP7Q9UHL4 492 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 SIGLEC7Q9Y286 467 aa6.97□□□□□ -1.29
NEDD9-208ENST00000504387 SLC35A3Q9Y2D2 325 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms