RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ZNF337Q9Y3M9 751 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 U3KQA8 63 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 HEATR5AQ86XA9 2040 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 DAPL1A0PJW8 107 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 CDC14CA4D256 554 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 MCIDASD6RGH6 385 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 TBX1O43435 398 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 SIGLEC6O43699 453 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 CTAG2O75638 210 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 SBK2P0C263 348 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 CELP19835 753 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 NR0B1P51843 470 aaKnown RBP10.54□□□□□ -0.72
USP46-204ENST00000503060 ZNF181Q2M3W8 571 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 SPANXN2Q5MJ10 180 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 RHBDD2Q6NTF9 364 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 ATP6V1C2Q8NEY4 427 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 OR10H4Q8NGA5 316 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 OR52E2Q8NGJ4 325 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 LRFN5Q96NI6 719 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 TBX5Q99593 518 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 TIMP4Q99727 224 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 MED18Q9BUE0 208 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 WWTR1Q9GZV5 400 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 LAT2Q9GZY6 243 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 ISG20L2Q9H9L3 353 aaKnown RBP10.54□□□□□ -0.72
USP46-204ENST00000503060 ADGRL4Q9HBW9 690 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 HAO2Q9NYQ3 351 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 KLHL21Q9UJP4 597 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 FBXL4Q9UKA2 621 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 GSTK1Q9Y2Q3 226 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 IER3IP1Q9Y5U9 82 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 CACNA1EQ15878 2313 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 SEC16AO15027 2179 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 IQCMA0A1B0GVH7 501 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 TSPAN2O60636 221 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 PDGFBP01127 241 aaPredicted RBP10.53□□□□□ -0.72
USP46-204ENST00000503060 MRPL3P09001 348 aaKnown RBP10.53□□□□□ -0.72
USP46-204ENST00000503060 ANKRD34CP0C6C1 535 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 TDGF1P13385 188 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 HIST1H1CP16403 213 aaKnown RBP10.53□□□□□ -0.72
USP46-204ENST00000503060 TGM1P22735 817 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 IL12BP29460 328 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 SDC2P34741 201 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 TGM4P49221 684 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 CCL7P80098 99 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 ARF1P84077 181 aaKnown RBP10.53□□□□□ -0.72
USP46-204ENST00000503060 BDH1Q02338 343 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 HLA-BQ31612 363 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 DPY19L2P2Q6ZN68 376 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 PLEKHG7Q6ZR37 379 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 LANCL3Q6ZV70 420 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 SLC29A4Q7RTT9 530 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 LYSMD2Q8IV50 215 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 ARIH2OSQ8N7S6 290 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 SYT14Q8NB59 555 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 FAM98AQ8NCA5 519 aaKnown RBP10.53□□□□□ -0.72
USP46-204ENST00000503060 OR4K13Q8NH42 304 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 CITED2Q99967 270 aaPredicted RBP10.53□□□□□ -0.72
USP46-204ENST00000503060 TMEM43Q9BTV4 400 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 TMED9Q9BVK6 235 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 ASB6Q9NWX5 421 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 BABAM2Q9NXR7 383 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 A0A0U1RQV5 110 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 A0A1W2PQM1 296 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 ISPDA4D126 451 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 A4D1N5 150 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 OR6C76A6NM76 312 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 ATP6V1G2-DDX39BF2Z307 99 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 IGF2P01344 180 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 GYPBP06028 91 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 MST1P26927 711 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 TNFSF8P32971 234 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 RPL4P36578 427 aaKnown RBP10.53□□□□□ -0.72
USP46-204ENST00000503060 RPS4XP62701 263 aaKnown RBP10.53□□□□□ -0.72
USP46-204ENST00000503060 PLCXD2Q0VAA5 305 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 HNRNPA0Q13151 305 aaKnown RBP10.53□□□□□ -0.72
USP46-204ENST00000503060 VASNQ6EMK4 673 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 DEFB123Q8N688 67 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 ZBTB34Q8NCN2 500 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 FAM83FQ8NEG4 500 aaPredicted RBP10.53□□□□□ -0.72
USP46-204ENST00000503060 SDR9C7Q8NEX9 313 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 STT3BQ8TCJ2 826 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 CAPSLQ8WWF8 208 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 PIGKQ92643 395 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 RIMS4Q9H426 269 aaPredicted RBP10.53□□□□□ -0.72
USP46-204ENST00000503060 CAMK2AQ9UQM7 478 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 UGT2A1Q9Y4X1 527 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 FER1L5A0AVI2 2057 aa10.53□□□□□ -0.72
USP46-204ENST00000503060 TNRC6BQ9UPQ9 1833 aaKnown RBP10.52□□□□□ -0.72
USP46-204ENST00000503060 hCG_1809904A0A1W2PP81 198 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 A0A1W2PPE2 198 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 A0A1W2PR64 198 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 LOC110117498-PIK3R3F6TDL0 507 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 HLA-DPB1P04440 258 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 GTF2E2P29084 291 aaKnown RBP10.52□□□□□ -0.73
USP46-204ENST00000503060 SLC6A8P48029 635 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 ZNF117Q03924 483 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 GPR50Q13585 617 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 GXYLT1Q4G148 440 aa10.52□□□□□ -0.73
USP46-204ENST00000503060 SHISA6Q6ZSJ9 500 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms