RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 DEFB123Q8N688 67 aa15.9■□□□□ 0.14
HMGXB3-201ENST00000502717 OR5D14Q8NGL3 314 aa15.9■□□□□ 0.14
HMGXB3-201ENST00000502717 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 A0A1W2PP55 124 aa15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 SERTM1A2A2V5 107 aa15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 IFITM5A6NNB3 132 aa15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 LATO43561 262 aa15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 MAKP20794 623 aa15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 SLC6A8P48029 635 aa15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 CBFBQ13951 182 aa15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 C2CD4CQ8TF44 421 aa15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 SMIM19Q96E16 107 aa15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 AUNIPQ9H7T9 357 aa15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 UBE2J1Q9Y385 318 aaPredicted RBP15.89■□□□□ 0.14
HMGXB3-201ENST00000502717 GON4LQ3T8J9 2241 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 SLC34A2O95436 690 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 POU3F4P49335 361 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 CDK5Q00535 292 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 MFSD12Q6NUT3 480 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 GLDNQ6ZMI3 551 aaPredicted RBP15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 CHAC2Q8WUX2 184 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 C14orf79Q96F83 325 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 MIXL1Q9H2W2 232 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 ISG20L2Q9H9L3 353 aaKnown RBP15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 KPTNQ9Y664 436 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 RNF215Q9Y6U7 377 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 ZC3H12DA2A288 527 aaKnown RBP15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 M0QYG6 137 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 CRTAPO75718 401 aaPredicted RBP15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 GPR75O95800 540 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 CNR1P21554 472 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 ZNF41P51814 821 aaPredicted RBP15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 CDONQ4KMG0 1287 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 ZFP82Q8N141 532 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 TERB2Q8NHR7 220 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 SLC22A8Q8TCC7 542 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 FBLIM1Q8WUP2 373 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 CMTM3Q96MX0 182 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 BARHL1Q9BZE3 327 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 SMIM3Q9BZL3 60 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 CA5BQ9Y2D0 317 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 ZFC3H1O60293 1989 aaKnown RBP15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 TMEM265A0A087WTH1 108 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 A0A1B0GWA3 101 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 A0A1W2PQU0 124 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 APBB3O95704 486 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 HOXB5P09067 269 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 ZNF250P15622 560 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 NME2P22392 152 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 VASPP50552 380 aaPredicted RBP15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 EXOSC7Q15024 291 aaKnown RBP15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 SLC9A3R2Q15599 337 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 LPAL2Q16609 132 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 GLYR1Q49A26 553 aaPredicted RBP15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 LYPD8Q6UX82 237 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 MMP21Q8N119 569 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 ST6GALNAC5Q9BVH7 336 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 LINC00597Q9H2U6 94 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 KLRF1Q9NZS2 232 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 MED16Q9Y2X0 877 aa15.89■□□□□ 0.13
HMGXB3-201ENST00000502717 FER1L6Q2WGJ9 1857 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 TMEM202A6NGA9 273 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 OR52A4PA6NMU1 304 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 H3BUI4 141 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 AQP8O94778 261 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 CDK3Q00526 305 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 PLCXD2Q0VAA5 305 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 CAMK2DQ13557 499 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 GSG1Q2KHT4 349 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 AADACL4Q5VUY2 407 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 ZNF836Q6ZNA1 936 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 CCDC71LQ8N9Z2 235 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 MFSD9Q8NBP5 474 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 OR51T1Q8NGJ9 327 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 PNPLA2Q96AD5 504 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 SPIN2AQ99865 258 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 SPIN2BQ9BPZ2 258 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 LRFN1Q9P244 771 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 OR5H14A6NHG9 310 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 LILRB3O75022 631 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 LDB3O75112 727 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 DIRAS3O95661 229 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 LIMS3P0CW19 117 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 LIMS4P0CW20 117 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 WBP2NLQ6ICG8 309 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 OR52R1Q8NGF1 315 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 ST7LQ8TDW4 575 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 LDAHQ9H6V9 325 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 FBXL4Q9UKA2 621 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 ICKQ9UPZ9 632 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 HRO43593 1189 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 CAV2P51636 162 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 AKR1C2P52895 323 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 AKR1C1Q04828 323 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 MFSD13AQ14CX5 517 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 SLC25A35Q3KQZ1 300 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 OR4K15Q8NH41 348 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 RHBDD1Q8TEB9 315 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 LRFN5Q96NI6 719 aa15.88■□□□□ 0.13
HMGXB3-201ENST00000502717 WDR76Q9H967 626 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms