RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 VASNQ6EMK4 673 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 CNIH2Q6PI25 160 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 SMARCD3Q6STE5 483 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 CFAP77Q6ZQR2 320 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 KLBQ86Z14 1044 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 SPRYD4Q8WW59 207 aaPredicted RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 SLC41A3Q96GZ6 507 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 SENP5Q96HI0 755 aaPredicted RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 C10orf90Q96M02 699 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 Q96M66 194 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 TIMM29Q9BSF4 260 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 RPP25Q9BUL9 199 aaKnown RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 ACTRT3Q9BYD9 372 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 SLC17A9Q9BYT1 436 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 RANGRFQ9HD47 186 aaPredicted RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 B3GAT2Q9NPZ5 323 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 HINT3Q9NQE9 182 aaKnown RBP8.15□□□□□ -1.1
FN1-227ENST00000498719 MBD2Q9UBB5 411 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 SLC17A4Q9Y2C5 497 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 GRIP1Q9Y3R0 1128 aa8.15□□□□□ -1.1
FN1-227ENST00000498719 TDRD6O60522 2096 aaKnown RBP8.15□□□□□ -1.11
FN1-227ENST00000498719 BRWD1Q9NSI6 2320 aa8.15□□□□□ -1.11
FN1-227ENST00000498719 CCDC182A6NF36 153 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 PRR19A6NJB7 356 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 GABRPO00591 440 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 HYAL3O43820 417 aaPredicted RBP8.14□□□□□ -1.11
FN1-227ENST00000498719 CA3P07451 260 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 SDHBP21912 280 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 IFNGR2P38484 337 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 ADORA2A-AS1P86434 159 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 ASAH1Q13510 395 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 MAPK14Q16539 360 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 DUSP5Q16690 384 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 ZFP69Q49AA0 526 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 DEFB134Q4QY38 66 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TRMT12Q53H54 448 aaKnown RBP8.14□□□□□ -1.11
FN1-227ENST00000498719 KLHL26Q53HC5 615 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 ZNF425Q6IV72 752 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 MFSD12Q6NUT3 480 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 CD200R1LQ6Q8B3 271 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 PAMR1Q6UXH9 720 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 ZNF836Q6ZNA1 936 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 ZNF620Q6ZNG0 422 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 MARCH9Q86YJ5 346 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 ARIH2OSQ8N7S6 290 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 DTX3Q8N9I9 347 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 MFSD9Q8NBP5 474 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 OR51G2Q8NGK0 314 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 OR52B4Q8NGK2 314 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 NEIL3Q8TAT5 605 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 UBASH3BQ8TF42 649 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 SMAP2Q8WU79 429 aaPredicted RBP8.14□□□□□ -1.11
FN1-227ENST00000498719 LCN9Q8WX39 176 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 ACOT11Q8WXI4 607 aaPredicted RBP8.14□□□□□ -1.11
FN1-227ENST00000498719 HCAR1Q9BXC0 346 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 SLC22A4Q9H015 551 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 MOV10Q9HCE1 1003 aaKnown RBP8.14□□□□□ -1.11
FN1-227ENST00000498719 ATP13A2Q9NQ11 1180 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 FBXO34Q9NWN3 711 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 NPAP1Q9NZP6 1156 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 PEMTQ9UBM1 199 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 SNX7Q9UNH6 387 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 ZNF443Q9Y2A4 671 aaPredicted RBP8.14□□□□□ -1.11
FN1-227ENST00000498719 GSTK1Q9Y2Q3 226 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 EXOSC1Q9Y3B2 195 aaKnown RBP8.14□□□□□ -1.11
FN1-227ENST00000498719 CACNA1IQ9P0X4 2223 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TBC1D3DA0A087WVF3 549 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TBC1D3IA0A087WXS9 549 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TBC1D3EA0A087X179 549 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TBC1D3KA0A087X1G2 549 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TBC1D3FA6NER0 549 aaPredicted RBP8.14□□□□□ -1.11
FN1-227ENST00000498719 SNTNA6NMZ2 147 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TBC1D3LB9A6J9 549 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 P2RX6O15547 441 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 GDF9O60383 454 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 ZGLP1P0C6A0 271 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TBC1D3HP0C7X1 549 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 CALCBP10092 127 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 FPR3P25089 353 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 CMPK1P30085 196 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 F2RL1P55085 397 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 FXYD6P3P58550 94 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 POLR2GP62487 172 aaKnown RBP eCLIP8.14□□□□□ -1.11
FN1-227ENST00000498719 PPP2CBP62714 309 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 PPP2CAP67775 309 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 DUSP6Q16828 381 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 PGGHGQ32M88 737 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 FAM214AQ32MH5 1076 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 C9orf50Q5SZB4 431 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TBC1D3GQ6DHY5 549 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TBC1D3CQ6IPX1 549 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TSSK4Q6SA08 328 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 NANOGNBQ7Z5D8 188 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 AMIGO1Q86WK6 493 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 NR2C2APQ86WQ0 139 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 TBC1D3Q8IZP1 549 aaPredicted RBP8.14□□□□□ -1.11
FN1-227ENST00000498719 Q8N402 240 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 GDPD1Q8N9F7 314 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 PFN4Q8NHR9 129 aa8.14□□□□□ -1.11
FN1-227ENST00000498719 SLC2A12Q8TD20 617 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms