RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 NEURL3Q96EH8 262 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 TRNT1Q96Q11 434 aaKnown RBP9.96□□□□□ -0.82
CDK9-205ENST00000498339 SLC38A1Q9H2H9 487 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 CACYBPQ9HB71 228 aaKnown RBP9.96□□□□□ -0.82
CDK9-205ENST00000498339 DECR2Q9NUI1 292 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 UBAP1Q9NZ09 502 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 SEC14L4Q9UDX3 406 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 POFUT2Q9Y2G5 429 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 WIPI2Q9Y4P8 454 aa9.96□□□□□ -0.82
CDK9-205ENST00000498339 C17orf100A8MU93 164 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 DEAF1O75398 565 aaPredicted RBP9.95□□□□□ -0.82
CDK9-205ENST00000498339 FAM157BP0CG42 384 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 ZNF35P13682 527 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 RPS4Y1P22090 263 aaKnown RBP9.95□□□□□ -0.82
CDK9-205ENST00000498339 CBLP22681 906 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 GIPRP48546 466 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 KLF3P57682 345 aaPredicted RBP9.95□□□□□ -0.82
CDK9-205ENST00000498339 FXNQ16595 210 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 PCGF3Q3KNV8 242 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 ANXA8L1Q5VT79 327 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 LEG1Q6P5S2 330 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 ZNF836Q6ZNA1 936 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 LRRC74BQ6ZQY2 392 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 USP51Q70EK9 711 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 WDFY1Q8IWB7 410 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 MFSD8Q8NHS3 518 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 STK35Q8TDR2 534 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 ST7LQ8TDW4 575 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 TAF15Q92804 592 aaKnown RBP eCLIP9.95□□□□□ -0.82
CDK9-205ENST00000498339 RAB1CQ92928 201 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 PPP1R36Q96LQ0 422 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 OXGR1Q96P68 337 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 OR2M2Q96R28 347 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 GPA33Q99795 319 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 PKP2Q99959 881 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 MECRQ9BV79 373 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 MTHFD2LQ9H903 347 aaPredicted RBP9.95□□□□□ -0.82
CDK9-205ENST00000498339 GRPEL1Q9HAV7 217 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 B3GAT2Q9NPZ5 323 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 HINT3Q9NQE9 182 aaKnown RBP9.95□□□□□ -0.82
CDK9-205ENST00000498339 OPN4Q9UHM6 478 aa9.95□□□□□ -0.82
CDK9-205ENST00000498339 PRSS51A0A1B0GVH4 220 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 CDHR4A6H8M9 788 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 M0R082 166 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 AIM2O14862 343 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 UBL3O95164 117 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 CLPTM1O96005 669 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 FSHBP01225 129 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 MT-ND5P03915 603 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 RNASE1P07998 156 aaKnown RBP9.94□□□□□ -0.82
CDK9-205ENST00000498339 NQO1P15559 274 aaKnown RBP9.94□□□□□ -0.82
CDK9-205ENST00000498339 MDKP21741 143 aaPredicted RBP9.94□□□□□ -0.82
CDK9-205ENST00000498339 ALDH3A1P30838 453 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 PCGF2P35227 344 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 ATP4BP51164 291 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 AQP5P55064 265 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 RAB1AP62820 205 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 GLO1Q04760 184 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 CAMK2DQ13557 499 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 RAB39AQ14964 217 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 TSTQ16762 297 aaKnown RBP9.94□□□□□ -0.82
CDK9-205ENST00000498339 WHAMMP3Q1A5X7 153 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 HFEQ30201 348 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 MMEL1Q495T6 779 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 PHYHD1Q5SRE7 291 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 HIST2H2BDQ6DRA6 164 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 C17orf107Q6ZR85 190 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 DOK3Q7L591 496 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 VRK2Q86Y07 508 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 UEVLDQ8IX04 471 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 OR8J2Q8NGG1 315 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 OR52P1PQ8NH57 321 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 ZNF417Q8TAU3 575 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 PNPT1Q8TCS8 783 aaKnown RBP9.94□□□□□ -0.82
CDK9-205ENST00000498339 DVL3Q92997 716 aaPredicted RBP9.94□□□□□ -0.82
CDK9-205ENST00000498339 LRRC58Q96CX6 371 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 TSPAN32Q96QS1 320 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 CCT8L2Q96SF2 557 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 ZNF587Q96SQ5 575 aaPredicted RBP9.94□□□□□ -0.82
CDK9-205ENST00000498339 ULBP2Q9BZM5 246 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 SLITRK2Q9H156 845 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 SAP30LQ9HAJ7 183 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 B3GNT2Q9NY97 397 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 ZNF69Q9UC07 566 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 FBXL3Q9UKT7 428 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 NUP50Q9UKX7 468 aa9.94□□□□□ -0.82
CDK9-205ENST00000498339 DSPPQ9NZW4 1301 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 SLC22A23A1A5C7 686 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 FTCDNL1E5RQL4 147 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 C1QCP02747 245 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 LCKP06239 509 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 DRD4P21917 467 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 OMGP23515 440 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 ACAA2P42765 397 aaKnown RBP9.93□□□□□ -0.82
CDK9-205ENST00000498339 CRYBB2P43320 205 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 EMX2Q04743 252 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 RBBP4Q09028 425 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 MFSD13AQ14CX5 517 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 SPATC1Q76KD6 591 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 SNX32Q86XE0 403 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms