RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 IGFBP1P08833 259 aaPredicted RBP10.55□□□□□ -0.72
CUX1-210ENST00000497815 TSPAN19P0C672 248 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 ANPEPP15144 967 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 SELENOPP49908 381 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 BIDP55957 195 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 CTXN1P60606 82 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 PRPS1P60891 318 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 ERVK-25P63136 954 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 TAF11Q15544 211 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 ACKR1Q16570 336 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 ANKDD1AQ495B1 522 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 SMARCD3Q6STE5 483 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 THSD4Q6ZMP0 1018 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 KIF18BQ86Y91 864 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 UBE2J2Q8N2K1 259 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 SVOPLQ8N434 492 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 FAM26EQ8N5C1 309 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 ZNF610Q8N9Z0 462 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 LRRC75AQ8NAA5 344 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 APH1AQ96BI3 265 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 NRBF2Q96F24 287 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 SAMD8Q96LT4 415 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 CIB1Q99828 191 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 DGCR6LQ9BY27 220 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 POLDIP3Q9BY77 421 aaKnown RBP10.55□□□□□ -0.72
CUX1-210ENST00000497815 NDEL1Q9GZM8 345 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 OR52D1Q9H346 318 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 PRSS50Q9UI38 385 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 ADAM18Q9Y3Q7 739 aa10.55□□□□□ -0.72
CUX1-210ENST00000497815 SLC35F4A4IF30 521 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 ZNF726A6NNF4 738 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 AKAP8O43823 692 aaKnown RBP10.54□□□□□ -0.72
CUX1-210ENST00000497815 PPP1R3DO95685 299 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 BCL10O95999 233 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 CGAP01215 116 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 ANXA8P13928 327 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 GSTM3P21266 225 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 POU1F1P28069 291 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 OR3A2P47893 321 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 DAPP51397 102 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 FXYD6P3P58550 94 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 LGALS3BPQ08380 585 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 CAMK2DQ13557 499 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 RFX4Q33E94 735 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 CLEC12AQ5QGZ9 265 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 FAHD1Q6P587 224 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 XKRXQ6PP77 449 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 KLHL17Q6TDP4 642 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 TFAP2EQ6VUC0 442 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 NHLRC1Q6VVB1 395 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 ZNF620Q6ZNG0 422 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 RASSF6Q6ZTQ3 369 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 WDFY1Q8IWB7 410 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 ZNF808Q8N4W9 903 aaPredicted RBP10.54□□□□□ -0.72
CUX1-210ENST00000497815 LILRB4Q8NHJ6 448 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 SSC4DQ8WTU2 575 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 TMEM45BQ96B21 275 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 OR2M2Q96R28 347 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 KATNB1Q9BVA0 655 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 IFT27Q9BW83 186 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 PLA2G12AQ9BZM1 189 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 PIGMQ9H3S5 423 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 FANCFQ9NPI8 374 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 PLSCR4Q9NRQ2 329 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 TBC1D23Q9NUY8 699 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 PARPBPQ9NWS1 579 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 ZNF346Q9UL40 294 aaKnown RBP10.54□□□□□ -0.72
CUX1-210ENST00000497815 CDH10Q9Y6N8 788 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 MPDZO75970 2070 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 ESPL1Q14674 2120 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 ARHGAP21Q5T5U3 1957 aa10.54□□□□□ -0.72
CUX1-210ENST00000497815 RELNP78509 3460 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 H3BN98 237 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 MITFO75030 526 aaPredicted RBP10.53□□□□□ -0.72
CUX1-210ENST00000497815 SLC43A1O75387 559 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 KRT33AO76009 404 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 CLDN14O95500 239 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 CD14P08571 375 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 CD8BP10966 210 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 SLC6A6P31641 620 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 DAP3P51398 398 aaKnown RBP10.53□□□□□ -0.72
CUX1-210ENST00000497815 TRIP10Q15642 601 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 SLC25A35Q3KQZ1 300 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 SLC36A3Q495N2 470 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 TSPO2Q5TGU0 170 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 OR52L1Q8NGH7 329 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 OR8D4Q8NGM9 314 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 ASB10Q8WXI3 467 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 EME1Q96AY2 570 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 TSPAN32Q96QS1 320 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 TSSK6Q9BXA6 273 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 GABARAPL1Q9H0R8 117 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 TXNIPQ9H3M7 391 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 KCNJ16Q9NPI9 418 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 PAPOLBQ9NRJ5 636 aaKnown RBP10.53□□□□□ -0.72
CUX1-210ENST00000497815 KRT84Q9NSB2 600 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 GRHPRQ9UBQ7 328 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 RCE1Q9Y256 329 aa10.53□□□□□ -0.72
CUX1-210ENST00000497815 RRP15Q9Y3B9 282 aaKnown RBP10.53□□□□□ -0.72
CUX1-210ENST00000497815 IER3IP1Q9Y5U9 82 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms