RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 HSD17B3P37058 310 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 ETV6P41212 452 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 ART1P52961 327 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 EEFSECP57772 596 aaKnown RBP2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 RANP62826 216 aaKnown RBP2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 SHC2P98077 582 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 EFNB1P98172 346 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 MS4A2Q01362 244 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 ABHD18Q0P651 414 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 FHL2Q14192 279 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 SPA17Q15506 151 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 TAF9Q16594 264 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 SCGB2B2Q4G0G5 96 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM74A1Q5RGS3 127 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC22A10Q63ZE4 541 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM211Q6ICI0 200 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 RHBDD2Q6NTF9 364 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 SMARCD3Q6STE5 483 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 DPY19L4Q7Z388 723 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 GABRG1Q8N1C3 465 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 STPG2Q8N412 459 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 ACBD7Q8N6N7 88 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 SIRT6Q8N6T7 355 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 C4orf32Q8N8J7 132 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 MDGA1Q8NFP4 955 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 OR4C5Q8NGB2 326 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 OR10G3Q8NGC4 313 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 OCC1Q8TAD7 63 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 NUBPLQ8TB37 319 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 C2CD4CQ8TF44 421 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 PTPMT1Q8WUK0 201 aaPredicted RBP2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 PIGTQ969N2 578 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 MMABQ96EY8 250 aaPredicted RBP2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 DCUN1D1Q96GG9 259 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 CELF6Q96J87 481 aaKnown RBP2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 KCTD14Q9BQ13 255 aaPredicted RBP2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 CCDC32Q9BV29 185 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 RBM24Q9BX46 236 aaKnown RBP2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 SNHG12Q9BXW3 62 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 BEX2Q9BXY8 128 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 TPSD1Q9BZJ3 242 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 ATG10Q9H0Y0 220 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC25A32Q9H2D1 315 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 FZD8Q9H461 694 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 FN3KQ9H479 309 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 WDR76Q9H967 626 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC28A3Q9HAS3 691 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 PLEKHA1Q9HB21 404 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 RAB9BQ9NP90 201 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 PIGVQ9NUD9 493 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 CALML5Q9NZT1 146 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 NXT1Q9UKK6 140 aaKnown RBP2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 FARSAQ9Y285 508 aaKnown RBP2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 ZFP30Q9Y2G7 519 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 ADAMTS12P58397 1594 aa2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 TCHHQ07283 1943 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 NKTRP30414 1462 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TARBP1Q13395 1621 aaKnown RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 LOC100509620A0A075B734 347 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 A0A1B0GW55 424 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM72A0PK05 275 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CPED1A4D0V7 1026 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TEX22C9J3V5 150 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 F6UZH7 168 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 G3V3Y1 287 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 NRP1O14786 923 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 EPHB6O15197 1021 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 SH3BGRLO75368 114 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 RCBTB2O95199 551 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CRYBA1P05813 215 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ZSCAN5DPP0CG00 497 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DUX4L2P0CJ85 424 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DUX4L3P0CJ86 424 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DUX4L4P0CJ87 422 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DUX4L5P0CJ88 424 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DUX4L6P0CJ89 424 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DUX4L7P0CJ90 424 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ARSBP15848 533 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 NCK1P16333 377 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CD72P21854 359 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ADRA1AP35348 466 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TNFSF10P50591 281 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 RAB7AP51149 207 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 UCNP55089 124 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TAS2R41P59536 307 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 UBE2KP61086 200 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 TLE1Q04724 770 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 KRTAP1-1Q07627 177 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 MTM1Q13496 603 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 RSU1Q15404 277 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 FCN2Q15485 313 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ACSM3Q53FZ2 586 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CTSL3PQ5NE16 218 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 PLAG1Q6DJT9 500 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 DNM1P34Q6PK57 102 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 CRIP3Q6Q6R5 217 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 UNQ9370/PRO34162Q6UXP9 181 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF517Q6ZMY9 492 aaPredicted RBP2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF620Q6ZNG0 422 aa2.81□□□□□ -1.96
SNRNP48-202ENST00000496946 Q6ZPA2 131 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms