RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 TAMM41Q96BW9 452 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 FBXO17Q96EF6 278 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 EPYCQ99645 322 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 MCHR1Q99705 422 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 SIKE1Q9BRV8 207 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 RHNO1Q9BSD3 238 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 TMEM43Q9BTV4 400 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 EVA1AQ9H8M9 152 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 ARGLU1Q9NWB6 273 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-209ENST00000496445 MED29Q9NX70 200 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 SELENONQ9NZV5 590 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 SLC13A4Q9UKG4 626 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 TRIM33Q9UPN9 1127 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 CORINQ9Y5Q5 1042 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 CHP2O43745 196 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 HOXB1P14653 301 aaPredicted RBP12.4□□□□□ -0.42
VTI1A-209ENST00000496445 NQO1P15559 274 aaKnown RBP12.4□□□□□ -0.42
VTI1A-209ENST00000496445 POU3F1Q03052 451 aaPredicted RBP12.4□□□□□ -0.42
VTI1A-209ENST00000496445 PUDPQ08623 228 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 MFSD13AQ14CX5 517 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 ENTPD8Q5MY95 495 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 CARD17Q5XLA6 110 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 ZNF613Q6PF04 617 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 C20orf196Q8IYI0 205 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 GPR137CQ8N3F9 429 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 FAM169BQ8N8A8 192 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 PIK3C3Q8NEB9 887 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 TSPEARQ8WU66 669 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 NANOS1Q8WY41 292 aaKnown RBP12.4□□□□□ -0.42
VTI1A-209ENST00000496445 TXNDC15Q96J42 360 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 SORCS2Q96PQ0 1159 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 EMC6Q9BV81 110 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 TMEM120AQ9BXJ8 343 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 ASPNQ9BXN1 380 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 CA10Q9NS85 328 aa12.4□□□□□ -0.42
VTI1A-209ENST00000496445 MRPL39Q9NYK5 338 aaKnown RBP12.4□□□□□ -0.42
VTI1A-209ENST00000496445 CPSF4LA6NMK7 179 aaKnown RBP12.39□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF99A8MXY4 864 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-209ENST00000496445 M0R3G1 203 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 FXYD1O00168 92 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 PLPP3O14495 311 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 AKAP8O43823 692 aaKnown RBP12.39□□□□□ -0.43
VTI1A-209ENST00000496445 CRYAAP02489 173 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 C8BP07358 591 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 CBR1P16152 277 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 PAX7P23759 505 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 EFNA4P52798 201 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 DSCR9P59020 149 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 CHRNB3Q05901 458 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 ADIPOQQ15848 244 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 TRMT5Q32P41 509 aaKnown RBP12.39□□□□□ -0.43
VTI1A-209ENST00000496445 CGB2Q6NT52 195 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 OR10A6Q8NH74 314 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 VANGL1Q8TAA9 524 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-209ENST00000496445 C10orf105Q8TEF2 133 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 NOX3Q9HBY0 568 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 PMF1-BGLAPU3KQ54 211 aa12.39□□□□□ -0.43
VTI1A-209ENST00000496445 IGHV2OR16-5A0A0B4J2B6 119 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 SLC35F4A4IF30 521 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 TLX2O43763 284 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-209ENST00000496445 TP53P04637 393 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-209ENST00000496445 OR4A8P0C604 315 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 IDH3GP51553 393 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-209ENST00000496445 SNRPD2P62316 118 aaKnown RBP12.38□□□□□ -0.43
VTI1A-209ENST00000496445 HGFACQ04756 655 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 LOXL1Q08397 574 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-209ENST00000496445 PMS2P3Q13401 168 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 CAMK2DQ13557 499 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 TMEM249Q2WGJ8 235 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 VHLLQ6RSH7 139 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 PATL1Q86TB9 770 aaKnown RBP12.38□□□□□ -0.43
VTI1A-209ENST00000496445 MDP1Q86V88 176 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 SLC30A8Q8IWU4 369 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 NUP37Q8NFH4 326 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 OR5J2Q8NH18 312 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 ADAMTS16Q8TE57 1224 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 FAM168AQ92567 244 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 MDFIQ99750 246 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 KCNS3Q9BQ31 491 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF426Q9BUY5 554 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 PCDHAC1Q9H158 963 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 MOV10Q9HCE1 1003 aaKnown RBP12.38□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF224Q9NZL3 707 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 NOX1Q9Y5S8 564 aa12.38□□□□□ -0.43
VTI1A-209ENST00000496445 SERPINI2O75830 405 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 PDE5AO76074 875 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 F12P00748 615 aaPredicted RBP12.37□□□□□ -0.43
VTI1A-209ENST00000496445 MT-ATP6P00846 226 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 CSF3P09919 207 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 BMP4P12644 408 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 SLC25A16P16260 332 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 SERPINF1P36955 418 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 NPRL3Q12980 569 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 EFNB3Q15768 340 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 ZNF74Q16587 644 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 VMACQ2NL98 169 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 RABL3Q5HYI8 236 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 C6orf52Q5T4I8 152 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 METTL21CQ5VZV1 264 aa12.37□□□□□ -0.43
VTI1A-209ENST00000496445 NANOGP8Q6NSW7 305 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms