RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 SAXO1Q8IYX7 474 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 TRPV1Q8NER1 839 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 OR52M1Q8NGK5 317 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 OR5D13Q8NGL4 314 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 OR2G3Q8NGZ4 309 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 GIMAP1Q8WWP7 306 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 FGF14Q92915 247 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 C10orf35Q96D05 121 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 TRIM44Q96DX7 344 aaPredicted RBP2.09□□□□□ -2.07
VPS50-219ENST00000495039 CEP170P1Q96L14 293 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 ZNF641Q96N77 438 aaPredicted RBP2.09□□□□□ -2.07
VPS50-219ENST00000495039 CCT7Q99832 543 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 ECSITQ9BQ95 431 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 GPR61Q9BZJ8 451 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 IFI27L2Q9H2X8 130 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 LY9Q9HBG7 655 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 MCCC2Q9HCC0 563 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 MRPL47Q9HD33 250 aaKnown RBP2.09□□□□□ -2.07
VPS50-219ENST00000495039 DMAP1Q9NPF5 467 aaPredicted RBP2.09□□□□□ -2.07
VPS50-219ENST00000495039 RBAKQ9NYW8 714 aaPredicted RBP2.09□□□□□ -2.07
VPS50-219ENST00000495039 CALYQ9NYX4 217 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 CRCT1Q9UGL9 99 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 PCYOX1Q9UHG3 505 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 ADAM28Q9UKQ2 775 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 PSG11Q9UQ72 335 aa2.09□□□□□ -2.07
VPS50-219ENST00000495039 C11orf94C9JXX5 98 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 H3BNH8 94 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 PEX7O00628 323 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 SPAG7O75391 227 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 MED6O75586 246 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 SPAG6O75602 509 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 MAGP20916 626 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 CEBPDP49716 269 aaPredicted RBP2.08□□□□□ -2.08
VPS50-219ENST00000495039 PFN3P60673 137 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 ACTA1P68133 377 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 OGDHQ02218 1023 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 ACVR1Q04771 509 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 REG3AQ06141 175 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 SCRN3Q0VDG4 424 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 GNMTQ14749 295 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 PTGES3Q15185 160 aaKnown RBP2.08□□□□□ -2.08
VPS50-219ENST00000495039 TMEM183BQ1AE95 376 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 TMEM255AQ5JRV8 349 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 COA6Q5JTJ3 125 aaKnown RBP2.08□□□□□ -2.08
VPS50-219ENST00000495039 PPP1R42Q7Z4L9 355 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 DHDDSQ86SQ9 333 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 TMEM183AQ8IXX5 376 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 VN1R2Q8NFZ6 395 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 ZNF596Q8TC21 504 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.08□□□□□ -2.08
VPS50-219ENST00000495039 ASB9Q96DX5 294 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 FOPNLQ96NB1 174 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 MTMR9Q96QG7 549 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 SLC39A3Q9BRY0 314 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 CDC42EP4Q9H3Q1 356 aaKnown RBP2.08□□□□□ -2.08
VPS50-219ENST00000495039 EXD2Q9NVH0 621 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 TBX21Q9UL17 535 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 CLEC4AQ9UMR7 237 aa2.08□□□□□ -2.08
VPS50-219ENST00000495039 IGLV11-55A0A075B6I3 123 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 XKRYO14609 159 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 CPLX1O14810 134 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 SS18L1O75177 396 aaPredicted RBP2.07□□□□□ -2.08
VPS50-219ENST00000495039 SUPT3HO75486 399 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 CAPN1P07384 714 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 CSF3P09919 207 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 GKN3PP0CG01 181 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 CD1CP29017 333 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 HSD17B2P37059 387 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 MNAT1P51948 309 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 GBX2P52951 348 aaPredicted RBP2.07□□□□□ -2.08
VPS50-219ENST00000495039 AIF1P55008 147 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 MADCAM1Q13477 382 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 GPM6BQ13491 265 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 FZD2Q14332 565 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 C16orf72Q14CZ0 275 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 DGUOKQ16854 277 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 ZBED5Q49AG3 693 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 OR52W1Q6IF63 320 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 CNIH2Q6PI25 160 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 ENPP6Q6UWR7 440 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 ZFP2Q6ZN57 461 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 H2AFVQ71UI9 128 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 PIANPQ8IYJ0 282 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 FAM83FQ8NEG4 500 aaPredicted RBP2.07□□□□□ -2.08
VPS50-219ENST00000495039 SMARCD2Q92925 531 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 SLC41A3Q96GZ6 507 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 PPA2Q9H2U2 334 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 TPK1Q9H3S4 243 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 AZI2Q9H6S1 392 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 NIPAL2Q9H841 368 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 SPATA7Q9P0W8 599 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 XCL2Q9UBD3 114 aa2.07□□□□□ -2.08
VPS50-219ENST00000495039 PPIAL4EA0A075B759 164 aa2.06□□□□□ -2.08
VPS50-219ENST00000495039 A0A1B0GVL5 298 aa2.06□□□□□ -2.08
VPS50-219ENST00000495039 PRSS37A4D1T9 235 aa2.06□□□□□ -2.08
VPS50-219ENST00000495039 SNTNA6NMZ2 147 aa2.06□□□□□ -2.08
VPS50-219ENST00000495039 TIMM8AO60220 97 aaPredicted RBP2.06□□□□□ -2.08
VPS50-219ENST00000495039 MGRN1O60291 552 aa2.06□□□□□ -2.08
VPS50-219ENST00000495039 FCMRO60667 390 aa2.06□□□□□ -2.08
VPS50-219ENST00000495039 ZNF324O75467 553 aaPredicted RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms