RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ZNF704Q6ZNC4 412 aaPredicted RBP14□□□□□ -0.17
LIME1-209ENST00000494776 SLC35D2Q76EJ3 337 aa14□□□□□ -0.17
LIME1-209ENST00000494776 CDK20Q8IZL9 346 aa14□□□□□ -0.17
LIME1-209ENST00000494776 ARHGAP24Q8N264 748 aa14□□□□□ -0.17
LIME1-209ENST00000494776 OR6N1Q8NGY5 312 aa14□□□□□ -0.17
LIME1-209ENST00000494776 NINJ1Q92982 152 aa14□□□□□ -0.17
LIME1-209ENST00000494776 BPIFA2Q96DR5 249 aa14□□□□□ -0.17
LIME1-209ENST00000494776 PYURFQ96I23 114 aa14□□□□□ -0.17
LIME1-209ENST00000494776 TAS2R5Q9NYW4 299 aa14□□□□□ -0.17
LIME1-209ENST00000494776 AMDHD2Q9Y303 409 aa14□□□□□ -0.17
LIME1-209ENST00000494776 HTR3EA5X5Y0 456 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 FFAR1O14842 300 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 WNT11O96014 354 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 T-ENOLP0DO92 83 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 SAGP10523 405 aaPredicted RBP13.99□□□□□ -0.17
LIME1-209ENST00000494776 ITGA2P17301 1181 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 RHCEP18577 417 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 LOXP28300 417 aaPredicted RBP13.99□□□□□ -0.17
LIME1-209ENST00000494776 ZNF83P51522 516 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 IST1P53990 364 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 BIDP55957 195 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 PRPS1P60891 318 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 UBE2NP61088 152 aaKnown RBP13.99□□□□□ -0.17
LIME1-209ENST00000494776 FXNQ16595 210 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 NCMAPQ5T1S8 102 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 NRMQ8IXM6 262 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 TMEM123Q8N131 208 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 FAM86B1Q8N7N1 296 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 OR1K1Q8NGR3 316 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 ACOT11Q8WXI4 607 aaPredicted RBP13.99□□□□□ -0.17
LIME1-209ENST00000494776 ADAD1Q96M93 576 aaKnown RBP13.99□□□□□ -0.17
LIME1-209ENST00000494776 C1QTNF6Q9BXI9 259 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 NMNAT1Q9HAN9 279 aaPredicted RBP13.99□□□□□ -0.17
LIME1-209ENST00000494776 CRLF2Q9HC73 371 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 GPR35Q9HC97 309 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 SLC17A5Q9NRA2 495 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 CCM2LQ9NUG4 571 aaPredicted RBP13.99□□□□□ -0.17
LIME1-209ENST00000494776 RNF115Q9Y4L5 304 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 SLC25A15Q9Y619 301 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 CSMD1Q96PZ7 3565 aa13.99□□□□□ -0.17
LIME1-209ENST00000494776 A0A096LPE4 126 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 A0A1W2PPZ6 126 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 A0A1W2PRG6 482 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 MCIDASD6RGH6 385 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 M0R1B8 84 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 BCL10O95999 233 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 PLAUP00749 431 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 H1F0P07305 194 aaKnown RBP13.98□□□□□ -0.17
LIME1-209ENST00000494776 SH3BGRP55822 239 aaPredicted RBP13.98□□□□□ -0.17
LIME1-209ENST00000494776 RPL18Q07020 188 aaKnown RBP13.98□□□□□ -0.17
LIME1-209ENST00000494776 BSPH1Q075Z2 132 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 ACKR1Q16570 336 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 CEACAM16Q2WEN9 425 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 HIKESHIQ53FT3 197 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 FGD3Q5JSP0 725 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 TMEM108Q6UXF1 575 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 LINGO2Q7L985 606 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 C20orf196Q8IYI0 205 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 RNF113BQ8IZP6 322 aaKnown RBP13.98□□□□□ -0.17
LIME1-209ENST00000494776 LRR1Q96L50 414 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 ANKRD19PQ9H560 264 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 INIPQ9NRY2 104 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 MAN2C1Q9NTJ4 1040 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 NDUFAF4Q9P032 175 aa13.98□□□□□ -0.17
LIME1-209ENST00000494776 MAGED1Q9Y5V3 778 aaPredicted RBP13.98□□□□□ -0.17
LIME1-209ENST00000494776 DPRXA6NFQ7 191 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 EFCAB9A8MZ26 197 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 RPL36A-HNRNPH2H7BZ11 118 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 PDE5AO76074 875 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 DIRAS1O95057 198 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 PRSS23O95084 383 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 STAMBPO95630 424 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 F13BP05160 661 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 FUT4P22083 530 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 AQP2P41181 271 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 CSNK1A1P48729 337 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 ART1P52961 327 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 ARF1P84077 181 aaKnown RBP13.97□□□□□ -0.17
LIME1-209ENST00000494776 VLDLRP98155 873 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 PRKCDQ05655 676 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 MELKQ14680 651 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 TBRG1Q3YBR2 411 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 ANKRD16Q6P6B7 361 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 TBPL2Q6SJ96 375 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 CYP2R1Q6VVX0 501 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 MBOAT2Q6ZWT7 520 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 MEX3DQ86XN8 651 aaKnown RBP13.97□□□□□ -0.17
LIME1-209ENST00000494776 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
LIME1-209ENST00000494776 WDR31Q8NA23 367 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 OR6X1Q8NH79 312 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 LIPHQ8WWY8 451 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 AKAP1Q92667 903 aaKnown RBP eCLIP13.97□□□□□ -0.17
LIME1-209ENST00000494776 ZNF566Q969W8 418 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 C7orf34Q96L11 122 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 PIP5K1AQ99755 562 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 ULBP2Q9BZM5 246 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 C1orf21Q9H246 121 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 NPAP1Q9NZP6 1156 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 ACTR3BQ9P1U1 418 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 PRPF19Q9UMS4 504 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms